Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1788 ATGGCTTACCGGCGTTGCCTTTTGATGAGAGGGAACCTTGTTGATCGGAGGTGCCATCCATCTTTCAGTTATGTTCTTCATAGCGATGAAGGGAGACAGGAAAAGTCTGAGGAAATATCATCTTCAGCAGGCGTTAGTAAGTTTGCCCAGATAAGGTCATTTGCAAGCTCTCTTAAGGGACCATTGGGGTTCTCCGCTCCTTCCCGAGATAGATTTATTTCTCCATGCACTGGATATGGTTTCTGCCGGTACATGTCGACAGTGAATCAGGGTTCAGATAAGATTGACAGTGTCTTACTCACTGATGTAGCTGATGTACTCACTGACACTACCATAGACACTATAGCTTCTCAGGCTGCCATTACTAACGAGGTTGCAATTGCTGCCGCGGATTCTTTTTTGCCTGTAATGGGCTTGCAGTACTTGATAGATGCTGTGCATTCCTACACTGGCTTAAATTGGTGGGCATCAATAGTTCTTACAACCCTATTGATTCGAAGTGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAACTTTCGTTAATGAGGCCTCACTTGGAGGAGATAAAGCAGCAGATGGACGGGATGGCTATGGATCCTGTAGCTGTTGCCAAAGGTCAGCAGCAAATGAAGAAGCTGTTTAAGGAATATGGTGTGACCCCCTTTACGCCATTGAAAGGACTCTTTATTCAAGGCCCTATTTTTGTTAGTTTTTTTCTTGCGATAACAAATATGGCTGAAAAAGTGCCATCATTCAAGCATGGTGGAGCTTATTGGTTTACTGATCTCACAACTCCAGATGCCTTGTACGTTTTTCCAGTTTTGGCTGCATTGTCATTCTTAATAACGGTAGAGTGTAATATGCAAGAAGGGATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAAGGTCTCCAGAGGTCTTGCGGTTCTTACGGTTCCTTTCACCATGGGATTTCCAAAGGCAATATTCTGTTACTGGGTTACGTCAAATTTGTTTTCACTTGTATATGGACTTGTGCTTAAAGTTCCTGGTGTAAAGAAAACATTGGGTATTCCTGAAATACCTGTTACTGGCCCCACCAGTGCTCCTCAATCGCCCTTTTCTATATTTCCCGCTCTAAAACAAGCTACCTCTGCGACAAATGAGTCAAGCCCAGTGGTACCTGATAAACCTTCAAAACATTCAAATACAAAGATATCATCTTCTTCTGTTATTAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAATAAGTGA 1287 0.425 MAYRRCLLMRGNLVDRRCHPSFSYVLHSDEGRQEKSEEISSSAGVSKFAQIRSFASSLKGPLGFSAPSRDRFISPCTGYGFCRYMSTVNQGSDKIDSVLLTDVADVLTDTTIDTIASQAAITNEVAIAAADSFLPVMGLQYLIDAVHSYTGLNWWASIVLTTLLIRSATVPLLINQLKATSKLSLMRPHLEEIKQQMDGMAMDPVAVAKGQQQMKKLFKEYGVTPFTPLKGLFIQGPIFVSFFLAITNMAEKVPSFKHGGAYWFTDLTTPDALYVFPVLAALSFLITVECNMQEGMEGNPVAGTMKKVSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLVLKVPGVKKTLGIPEIPVTGPTSAPQSPFSIFPALKQATSATNESSPVVPDKPSKHSNTKISSSSVISQRLRSLEKQVKGRKKNK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1788 428 PANTHER OXA1 1 387 IPR001708 GO:0016021|GO:0032977
Vra7g1788 428 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1-RELATED 1 387 - -
Vra7g1788 428 MobiDBLite consensus disorder prediction 385 428 - -
Vra7g1788 428 MobiDBLite consensus disorder prediction 385 415 - -
Vra7g1788 428 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 153 343 IPR028055 -
Vra7g1788 428 Pfam 60Kd inner membrane protein 154 343 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1788 Vra-Chr7 37041188 37047620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1788 157 428 Chloroplast and Mitochondria Gene Families AT2G28800 22.383 3.80e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1788 K03217 - gmx:100817052 696.041