Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1783 ATGGACAGCACCGATTCATCTTCAGGCTCTCAGCACCCACACCTCCCTCCAGGCTTTCGCTTCCACCCCACCGACGAAGAACTCGTCGTTCACTACCTCAAGAGAAAAGCTTCTTCTACACCCCTTCCCGTCGCCATCATCGCCGACGTTGATCTCTACAAGTTCGACCCTTGGGAGCTCCCAAGTAAAGCAACTTTTGGTGAACAAGAGTGGTACTTTTTCAGCCCGAGGGATCGGAAATACCCAAATGGGGTTAGACCCAACAGAGCTGCTACTTCTGGGTATTGGAAAGCAACCGGAACTGACAAACCTATACTAACATCTGATGGGCACCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTCTACGGTGGAAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCATGAATATAGGCTTGTTCATGATTCCTTTAATTCAACCTCAAAACCCCCTCCTCTTGTTCCTCCAAACAAGAAAAATTCCCTCAGGCTTGATGATTGGGTGTTGTGTCGAATATACAAGAAAAGCAATAGCACCACCGTAACAAGGCCACCCTTGATGGAACATGGAGAGGAGCTTTCAATGGAGAACATGCTTCCAACGATGTCAACTTTGTCAATGGCTAATAACAATACTCAAAACTCTAAACCTCCGTCTTCGAGGAGTACGAGTTATGGAGCACTGGGACTTGAAAATGATGACAACTTCTTCGATGGAATCTTAGCCGTTGATCATCAGAGCATGCAAAGTGGTTCTGATTCTCACCTTTTCTGTCCAAACTCAAAGGGTACCAACTTTCCTATGAAACGTGCTCTCACATCACAACAACTTTGGAACGAGACAGGGTCTCCGGGATCATCTTCTTCTTGTAAGCGATTCCATGGTGATCTTAACAGTGGAAGCAGCAACGCTGAGGACAACGATTCCTTTGTTTCCTTGCTTAGCCAGTTTCCTCAGAACGCAACTTTTCAACCAAACGCGATTCATGGCTCCGTTGGGAATGGTGCGCAGAGGCAACAACAGTTTCAACTTCCTGGTATAAATTGGAACTGA 1062 0.4605 MDSTDSSSGSQHPHLPPGFRFHPTDEELVVHYLKRKASSTPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPILTSDGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVHDSFNSTSKPPPLVPPNKKNSLRLDDWVLCRIYKKSNSTTVTRPPLMEHGEELSMENMLPTMSTLSMANNNTQNSKPPSSRSTSYGALGLENDDNFFDGILAVDHQSMQSGSDSHLFCPNSKGTNFPMKRALTSQQLWNETGSPGSSSSCKRFHGDLNSGSSNAEDNDSFVSLLSQFPQNATFQPNAIHGSVGNGAQRQQQFQLPGINWN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1783 353 MobiDBLite consensus disorder prediction 281 308 - -
Vra7g1783 353 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Vra7g1783 353 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 325 - -
Vra7g1783 353 MobiDBLite consensus disorder prediction 209 230 - -
Vra7g1783 353 MobiDBLite consensus disorder prediction 1 22 - -
Vra7g1783 353 SUPERFAMILY NAC domain 10 178 IPR036093 GO:0003677|GO:0006355
Vra7g1783 353 PANTHER NAC TRANSCRIPTION FACTOR 56 1 325 - -
Vra7g1783 353 ProSiteProfiles NAC domain profile. 15 178 IPR003441 GO:0003677|GO:0006355
Vra7g1783 353 Gene3D NAC domain 24 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1783 Vra-Chr7 36886763 36888678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1783 5 353 NAC Transcription Factor Family AT1G61110 53.911 9.50e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g1783 NAM 9.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1783 - - gmx:100797132 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1783 7 36886763 36888678 Vra10g1351 10 18809466 18811403 PCT