Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1773 ATGGGTTGTTGGAATTCAGACATGAATTTCCAAATTTTCTTCTTTTCAATGTTGATTTTCGGTGCAACTTTCTGTGTTGCGGACACTGATCCACTTGATGTTGCGGCAATCAATAGTTTGTATGTGGCTCTTGGCTCACCACCCCTTGAGGGGTGGAAAGCCATAGGAGGAGATCCCTGCTTGGAACAATGGCAAGGTGTGCGTTGTGTCTTCTCCAACATAACTGCTTTGCTACTGGGAGGCATGAGTTTAAGTGGACAACTGGGAAGTAATTTGGATTTCCCATCCATCATAGAATTGGATCTTAGCAACAACCAGATTGGAGGGGCCATTCCATCCAGTTTGTCCCCTACTTTAAGGAACTTGTCACTCTCAGCTAATCAATTAAATGGAAGCATTCCANATGCCTTGTCCTCATTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAATGGAGAAATTCCAGATGCATTTCTACACTTTACTGATTTGATGAATATGGATCTGTCTGGAAACAACTTGAGTGGTCAGCTGCCTCCCTCAATGGGGAATTTGTCATCTCTTAACACATTAAATTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATATATTCTCTGGGCCAATTCCTCCGGAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGGAATCCGTTTAATACTACTATCATTCCATCACCTCCAGCTGCATCCCCTGCACCCCTTGCTATGGCTCCCTCCCCAGAAATATCACCTTGGAAAGTGGCCANTAGTCCATCTGCTACCACCATAAAAGCTCCAATACCTGCAATTGCTGAGAGGTCTTTCAGAACCAAGAAATTAGTTTGGATTATTGGTGCANGCCTTTTAACATTTATTGCATTAGGAGTTTGTCTTCTTATGTTGTGGTGCTTTAAGAGAAGACCAGAGAACAAGAGTTATAAGAAACACAACATGAACGTGTATAAAAGATCTTTGCATAAACGTACAAGCAGTGACTCCCCTTTTGAAGCAACTGATGATGAGGAGAAAGGATGGGGTTCAAAACTTCCACCCTTGCAGTCAGCGCCACCACATAAACTCCCAATCATTCCTGGAGAGAATTTAATCATTAATCGAGCTATCTTTGGTGAAGANACCAAAAGACAAATTGTAACAAATTCCATCAAAGTTTATACTGTTGCATCACTTCAGCAATACACAAATAGTTTTTCCCTAGAAAATTATATTGGCGAAGGCATGCTTGGCCCTGTTTATAGGGCTGAACTCCCTGATGGAAAGTTACTGGCAGTCAGGAAGCTGAATGCTACTTCTTCCATTGACCTAAACCACGAACAGTTTCTTCAATTAGCTTCCAGTGTCTCCAAAATTCAACATGCTAATATTGTAAAGTTTATGGGCTACTGTGCCGAGCATAGCCAACACTTACTTGTATATGAGTATTGTAGTAATGGCACCCTTCATGATGCATTACATACAGATGCTAAACTTCAGATTAACCTTTCATGGGATGATCGCATTCAAGTGTCACTTGGAGCGGCAAGAGCTCTAGAGTATTTGCATGAGTACTTTCAGCCACCTATTGTGCACGGAAACTTTACATCTGCTAATATACTACTAAATGACAAGTTGGAAGTTCAGGTCTCTGATTGTGGATTAGGTTCTTTACTATCTTCAGGCTCCGCAAGTCGGTTGTCGGGACACCAACTCACAACTAATGGTTACAGTGCCCCAGAATACGAGAATGGAAGTTATACACTTCAAAGTGATGTCTTTAGCTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCACTGGCTCGTGGAGAGCAGTTTTTGGTTAGATGGGCAGTCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCTTCTTTAAATGCAGAATATCCTAAGAAATCCTTGTCACGTTTTGCAGACATTATTTCCTCATGTATACAGCATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGACCTCTTGCGAATGATGTAG 2103 0.4137 MGCWNSDMNFQIFFFSMLIFGATFCVADTDPLDVAAINSLYVALGSPPLEGWKAIGGDPCLEQWQGVRCVFSNITALLLGGMSLSGQLGSNLDFPSIIELDLSNNQIGGAIPSSLSPTLRNLSLSANQLNGSIPXALSSLTQLSDLSLKDNHLNGEIPDAFLHFTDLMNMDLSGNNLSGQLPPSMGNLSSLNTLNLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAASPAPLAMAPSPEISPWKVAXSPSATTIKAPIPAIAERSFRTKKLVWIIGAXLLTFIALGVCLLMLWCFKRRPENKSYKKHNMNVYKRSLHKRTSSDSPFEATDDEEKGWGSKLPPLQSAPPHKLPIIPGENLIINRAIFGEXTKRQIVTNSIKVYTVASLQQYTNSFSLENYIGEGMLGPVYRAELPDGKLLAVRKLNATSSIDLNHEQFLQLASSVSKIQHANIVKFMGYCAEHSQHLLVYEYCSNGTLHDALHTDAKLQINLSWDDRIQVSLGAARALEYLHEYFQPPIVHGNFTSANILLNDKLEVQVSDCGLGSLLSSGSASRLSGHQLTTNGYSAPEYENGSYTLQSDVFSFGVVMLELLTGRKSYDSSLARGEQFLVRWAVPQLHDIDALSKMVDPSLNAEYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRMM* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1773 700 MobiDBLite consensus disorder prediction 350 369 - -
Vra7g1773 700 Gene3D Phosphorylase Kinase; domain 1 387 499 - -
Vra7g1773 700 Pfam Protein tyrosine and serine/threonine kinase 424 696 IPR001245 GO:0004672|GO:0006468
Vra7g1773 700 Gene3D Ribonuclease Inhibitor 35 251 IPR032675 -
Vra7g1773 700 Gene3D Transferase(Phosphotransferase) domain 1 500 700 - -
Vra7g1773 700 PANTHER LEUCINE RICH REPEAT KINASE 2 11 345 - -
Vra7g1773 700 PANTHER LEUCINE RICH REPEAT KINASE 2 400 700 - -
Vra7g1773 700 ProSiteProfiles Protein kinase domain profile. 422 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1773 700 SUPERFAMILY Protein kinase-like (PK-like) 402 696 IPR011009 -
Vra7g1773 700 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 400 700 - -
Vra7g1773 700 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 11 345 - -
Vra7g1773 700 SUPERFAMILY L domain-like 33 236 - -
Vra7g1773 700 MobiDBLite consensus disorder prediction 350 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1773 Vra-Chr7 36723187 36730574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1773 19 700 Strubbelig Receptor Gene Family AT4G03390 50.200 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vra7g1773 PK_Tyr_Ser-Thr 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1773 - - pvu:PHAVU_002G224200g 1206.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1773 7 36723187 36730574 Vra10g1359 10 18878954 18886022 PCT