Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1765 ATGGCATTGGCAAGGATTGCTAGGGCCAACTTCAGAAAATCAAAAGGTGCTTATGGTAGTTATGCGAGTGAGAAGGATTTATTCAAAGTGGGAGGATACACAAGCATACGGGACACGACTTCCCATGTAAATTTCAATTCAGATGAGAAGTTTTCATATGTTCCAACAATTAAGGAACATAACTGCGTGAACTTTGCAATGAGGGGAATATCAGGAACTCCATACTATCGGTTTCCTTCTGCTAACGCACAGACGGTTGTTGAGGAGTCAGAGTCAGAGTTGGAGAACGATCAGCGTAGATATGCAGGACTAGAGGCAACAAAGCCAGGTGAAAAGCCTAGGGTGGTTGTTCTTGGTACGGGTTGGGCTGCGTGTCGCTTCCTCAAAGGGCTTGACACCAAAATCTATGATGTTGTGTGCATATCACCAAGAAATCACATGGTTTTTACTCCTTTGCTGGCTTCAACATGTGTTGGAACCCTGGAATTCAGAACTGTTGCTGAGCCTGTCTCCAGAATACAAGATGCATTAGCGAAAGACCCCAACTCCTTCTTCTTTCTAGCTTCTTGCACAGGCATCGACACTGGCAAACATGAAGTCTATTGTGAGGCAGTCAACAATGGTGAATTGCCCCGAGAGCCTTACGAATTTAAAGTCGCGTATGACAAGCTTGTCATTGCAGCAGGAGCCGAGGCTTTGACTTTTGGTATCAAGGGAGTAGAGGAAAATGCCTTTTTTCTTCGTGATGTGAACCATGCTCAAGAAATAAGGAAGAGACTTCTTCTTAATCTGATGCTTTCGGAAAATCCAGGCATATCGGAACAAGAAAAGAAACGCCTTCTACACTGTGTAGTTATTGGAGGTGGCCCTACAGGAGTGGAGTTTAGTGGTGAATTGAGTGATTTCATCACCACGGATGTTCATGAGCGTTATACTCATGTCAAAGATTACATTCACGTTACACTAATTGAGGCAAATGAGATACTGTCATCCTTTGATGTTAGCCTACGGCAATATGCAACAAAGCACTTAACAAAGTCTGGTGTCCGTCTTAAGCGTGGTGTAGTGAAGGAAGTGCATAGCAAAGAGATCATTCTGAGTGATGGAACAAAAGTTCCTTATGGCCTCTTGGTCTGGTCCACAGGAGTTGGTCCTTCAAAGTTTGTGAAAGCCTTAAATCTTCCTAAATCTCCAGGCGGAAGAATTGGTGTAGATGAATGGTTTCGTGTTCCTTCTGTGGAAGATGTCTTTGCCCTTGGAGATTGTGCTGGTTTTCTTGAACAAACCGGAAGGCCTGTGCTTCCAGCTCTAGCTCAGGTTGCTGAAAGGGAAGGGAAGTTTCTTGTGGAGCTGTTCAACAAAATTGGGAAGCAGAATGGAGGCAAGGCTTTCTCTGCAAAAGGGACGCCACTTGGAGAGCCTTTTGTGTATAAGCATATTGGGAGCATGGCATCTGTAGGTGGCTACAAAGCACTTGTTGATCTACGGCAGTCAAAGGATGCAAAGGGATTGTCACTTGCTGGTTTTCTTAGCTGGATGATATGGCGCTCCGCATATCTTACACGTGTCCTTAGCTGGAGGAACAGGCTTTACGTGGCAGTAAACTGGGCCACCACATTAGTCTTTGGCAGAGACAATAGTAGGATAGGTTGA 1653 0.4483 MALARIARANFRKSKGAYGSYASEKDLFKVGGYTSIRDTTSHVNFNSDEKFSYVPTIKEHNCVNFAMRGISGTPYYRFPSANAQTVVEESESELENDQRRYAGLEATKPGEKPRVVVLGTGWAACRFLKGLDTKIYDVVCISPRNHMVFTPLLASTCVGTLEFRTVAEPVSRIQDALAKDPNSFFFLASCTGIDTGKHEVYCEAVNNGELPREPYEFKVAYDKLVIAAGAEALTFGIKGVEENAFFLRDVNHAQEIRKRLLLNLMLSENPGISEQEKKRLLHCVVIGGGPTGVEFSGELSDFITTDVHERYTHVKDYIHVTLIEANEILSSFDVSLRQYATKHLTKSGVRLKRGVVKEVHSKEIILSDGTKVPYGLLVWSTGVGPSKFVKALNLPKSPGGRIGVDEWFRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAEREGKFLVELFNKIGKQNGGKAFSAKGTPLGEPFVYKHIGSMASVGGYKALVDLRQSKDAKGLSLAGFLSWMIWRSAYLTRVLSWRNRLYVAVNWATTLVFGRDNSRIG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1765 550 PANTHER OS07G0564500 PROTEIN 4 549 - -
Vra7g1765 550 PANTHER NADH DEHYDROGENASE 4 549 IPR045024 GO:0003954|GO:0006116
Vra7g1765 550 SUPERFAMILY FAD/NAD(P)-binding domain 282 450 IPR036188 -
Vra7g1765 550 Coils Coil 80 107 - -
Vra7g1765 550 Gene3D - 104 549 - -
Vra7g1765 550 SUPERFAMILY FAD/NAD(P)-binding domain 112 327 IPR036188 -
Vra7g1765 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Vra7g1765 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 282 300 - -
Vra7g1765 550 PRINTS FAD-dependent pyridine nucleotide reductase signature 401 423 - -
Vra7g1765 550 Pfam Pyridine nucleotide-disulphide oxidoreductase 114 445 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1765 Vra-Chr7 36560587 36565425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1765 433 549 Chloroplast and Mitochondria Gene Families AT4G21490 31.405 3.63e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1765 K03885 - gmx:100814927 977.237