LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra7g1765	ATGGCATTGGCAAGGATTGCTAGGGCCAACTTCAGAAAATCAAAAGGTGCTTATGGTAGTTATGCGAGTGAGAAGGATTTATTCAAAGTGGGAGGATACACAAGCATACGGGACACGACTTCCCATGTAAATTTCAATTCAGATGAGAAGTTTTCATATGTTCCAACAATTAAGGAACATAACTGCGTGAACTTTGCAATGAGGGGAATATCAGGAACTCCATACTATCGGTTTCCTTCTGCTAACGCACAGACGGTTGTTGAGGAGTCAGAGTCAGAGTTGGAGAACGATCAGCGTAGATATGCAGGACTAGAGGCAACAAAGCCAGGTGAAAAGCCTAGGGTGGTTGTTCTTGGTACGGGTTGGGCTGCGTGTCGCTTCCTCAAAGGGCTTGACACCAAAATCTATGATGTTGTGTGCATATCACCAAGAAATCACATGGTTTTTACTCCTTTGCTGGCTTCAACATGTGTTGGAACCCTGGAATTCAGAACTGTTGCTGAGCCTGTCTCCAGAATACAAGATGCATTAGCGAAAGACCCCAACTCCTTCTTCTTTCTAGCTTCTTGCACAGGCATCGACACTGGCAAACATGAAGTCTATTGTGAGGCAGTCAACAATGGTGAATTGCCCCGAGAGCCTTACGAATTTAAAGTCGCGTATGACAAGCTTGTCATTGCAGCAGGAGCCGAGGCTTTGACTTTTGGTATCAAGGGAGTAGAGGAAAATGCCTTTTTTCTTCGTGATGTGAACCATGCTCAAGAAATAAGGAAGAGACTTCTTCTTAATCTGATGCTTTCGGAAAATCCAGGCATATCGGAACAAGAAAAGAAACGCCTTCTACACTGTGTAGTTATTGGAGGTGGCCCTACAGGAGTGGAGTTTAGTGGTGAATTGAGTGATTTCATCACCACGGATGTTCATGAGCGTTATACTCATGTCAAAGATTACATTCACGTTACACTAATTGAGGCAAATGAGATACTGTCATCCTTTGATGTTAGCCTACGGCAATATGCAACAAAGCACTTAACAAAGTCTGGTGTCCGTCTTAAGCGTGGTGTAGTGAAGGAAGTGCATAGCAAAGAGATCATTCTGAGTGATGGAACAAAAGTTCCTTATGGCCTCTTGGTCTGGTCCACAGGAGTTGGTCCTTCAAAGTTTGTGAAAGCCTTAAATCTTCCTAAATCTCCAGGCGGAAGAATTGGTGTAGATGAATGGTTTCGTGTTCCTTCTGTGGAAGATGTCTTTGCCCTTGGAGATTGTGCTGGTTTTCTTGAACAAACCGGAAGGCCTGTGCTTCCAGCTCTAGCTCAGGTTGCTGAAAGGGAAGGGAAGTTTCTTGTGGAGCTGTTCAACAAAATTGGGAAGCAGAATGGAGGCAAGGCTTTCTCTGCAAAAGGGACGCCACTTGGAGAGCCTTTTGTGTATAAGCATATTGGGAGCATGGCATCTGTAGGTGGCTACAAAGCACTTGTTGATCTACGGCAGTCAAAGGATGCAAAGGGATTGTCACTTGCTGGTTTTCTTAGCTGGATGATATGGCGCTCCGCATATCTTACACGTGTCCTTAGCTGGAGGAACAGGCTTTACGTGGCAGTAAACTGGGCCACCACATTAGTCTTTGGCAGAGACAATAGTAGGATAGGTTGA	1653	0.4483	MALARIARANFRKSKGAYGSYASEKDLFKVGGYTSIRDTTSHVNFNSDEKFSYVPTIKEHNCVNFAMRGISGTPYYRFPSANAQTVVEESESELENDQRRYAGLEATKPGEKPRVVVLGTGWAACRFLKGLDTKIYDVVCISPRNHMVFTPLLASTCVGTLEFRTVAEPVSRIQDALAKDPNSFFFLASCTGIDTGKHEVYCEAVNNGELPREPYEFKVAYDKLVIAAGAEALTFGIKGVEENAFFLRDVNHAQEIRKRLLLNLMLSENPGISEQEKKRLLHCVVIGGGPTGVEFSGELSDFITTDVHERYTHVKDYIHVTLIEANEILSSFDVSLRQYATKHLTKSGVRLKRGVVKEVHSKEIILSDGTKVPYGLLVWSTGVGPSKFVKALNLPKSPGGRIGVDEWFRVPSVEDVFALGDCAGFLEQTGRPVLPALAQVAEREGKFLVELFNKIGKQNGGKAFSAKGTPLGEPFVYKHIGSMASVGGYKALVDLRQSKDAKGLSLAGFLSWMIWRSAYLTRVLSWRNRLYVAVNWATTLVFGRDNSRIG*	551

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra7g1765	550	PANTHER	OS07G0564500 PROTEIN	4	549	-	-
	Vra7g1765	550	PANTHER	NADH DEHYDROGENASE	4	549	IPR045024	GO:0003954\|GO:0006116
	Vra7g1765	550	SUPERFAMILY	FAD/NAD(P)-binding domain	282	450	IPR036188	-
	Vra7g1765	550	Coils	Coil	80	107	-	-
	Vra7g1765	550	Gene3D	-	104	549	-	-
	Vra7g1765	550	SUPERFAMILY	FAD/NAD(P)-binding domain	112	327	IPR036188	-
	Vra7g1765	550	PRINTS	FAD-dependent pyridine nucleotide reductase signature	221	239	-	-
	Vra7g1765	550	PRINTS	FAD-dependent pyridine nucleotide reductase signature	282	300	-	-
	Vra7g1765	550	PRINTS	FAD-dependent pyridine nucleotide reductase signature	401	423	-	-
	Vra7g1765	550	Pfam	Pyridine nucleotide-disulphide oxidoreductase	114	445	IPR023753	GO:0016491

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra7g1765	Vra-Chr7	36560587	36565425	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra7g1765	433	549	Chloroplast and Mitochondria Gene Families	AT4G21490	31.405	3.63e-13	70.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra7g1765	K03885		-	gmx:100814927	977.237

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