Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1746 ATGGGTGATGGAGAAGAATTCGCCGGAGCTTCGGGTCTGCGGCGAGCGGTGGAGCTCATCCTTGCTGTGCTCTCTCTCTCGCACTCGATTCGTGTCTTCGCGGGAAAATGGCAGCTCATTCGTAACAAGCTGGAGGAGCTTCACGGAGGTTTAGTTGCCGCCGAGAACTGCGACTCCGGGGAGAGCCCGTCGCTTTCACGGCTGGTGGGGGCGGTGGCGGCCACCGCGACGGAATGCCACGATCTGTGTCGGCGCTGCGTGGATGTTTCCTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACGTGGCGTTCGCGAAGCTCGATGCGCACGCGAGGAAGCTCTCTGAGATATACAAAAAGGGGATTTTAACAAATGGGTTCGCGCTGGTTGTGTCAAAGCCGAGTCTTGGCTGTTCGAAAGAAGACATGAGGTTCTACGTGAGGGACTTAACGACGAGGATGAAGATTGGAGATTTGGGGATGAAACGACAGGCGTTGCGGAACCTCCTAGAAGTTGTGCTGGAGGATGAAAAGTATGTGAAGGTGGTTGTTGACGTGGGTGACGTGGTTCATTTGTTGGTGGGGTTTTTGGGTTCTAATGAGGCTGAAATCCAGGAGGAGAGTGCTAAGGTGGTTTCTGTGGTTGCTGGGTTTGATTCTTACAAAGGGGTTTTGGTTGGGGCGGGGGTGATTGCTCCTTTGGTTAAGGTTCTGGATTATGGGAGTGATTCGGGGAAGGTTGCGGCGGCGAGGTGTTTGGTGAAGTTGACTGAAAATTCGGACAATGCTTGGTGTGTTTCGGCTCATGGGGGGGTCAGTGTGTTGTTGAAGATATGTGGTGGTGGTGATTGTGGAGGTGATTTGGTCGCACCTGCTTGTGGGGTGTTGAGGAATCTCGTTGGTGTTGAGGAGATTAAGAGGTTTATGGTCGATGAGGGTGCTGTGTCAACTTTCATTAAGCTCGTGAGATCGAAGGAGGAAGCGATTCAGGTGAATTCGATTGGGTTTATTTTGAGTATTGCCTCTGGGGATGAGTTGGTTAGGGAGATGGTGATCAGAGAGGGAGGGATTCGTGCTTTGTTGCGTGTTTTGCATCCTAAGTGGTCTTATTCTTGTAAAACCAGGGAGGTAGCAATGAGGGCTGTTGAGGATTTGTGTTTCTGTTCACCTAGTTCTGTGGGTGTGTTGATGAGTTATGGCTTTGTGGATCAACTGACATACTATATTCGAAATGGGGAGGTTTCGATTCAGGAGTTGGCATTGAAAGTGGCGTTTAGGTTGTCTGGAACATCTGAGGAGGCCAAGAAAGCAATGGGGGACGCAGGGTTTTTGCCAGAGTTTGTTAAGTTTCTTAATGCAAAATCCTTTGAGGCTCGAGAAATGGCAGCCGAGGCACTCTCTGGCATGGTTACGGTGCCTAGAAATAGAAAGCGATTCGTGCAGGATGACCATAATATTGCCCTTCTTCTGCAGTTGCTTGATCCAGAGGAGGGAAATTCTGGTAATAAAAAGTTCTTAATCTCTATATTAATGTCTTTAACGAGTTGCACTAGTGGGAGGAAAAAGATTGTTAGTTCTGAATATGCAAAAAACATAGAAAAACTCGCTGAAGTTTCTTCTGAAGCCAAGAAACTTGTCAAGAAGCTATCCACAAACCGATTCCGAAGTATGTTGAATGGAATCTGGCACTCATGA 1698 0.4888 MGDGEEFAGASGLRRAVELILAVLSLSHSIRVFAGKWQLIRNKLEELHGGLVAAENCDSGESPSLSRLVGAVAATATECHDLCRRCVDVSYSGKLLMQSDLDVAFAKLDAHARKLSEIYKKGILTNGFALVVSKPSLGCSKEDMRFYVRDLTTRMKIGDLGMKRQALRNLLEVVLEDEKYVKVVVDVGDVVHLLVGFLGSNEAEIQEESAKVVSVVAGFDSYKGVLVGAGVIAPLVKVLDYGSDSGKVAAARCLVKLTENSDNAWCVSAHGGVSVLLKICGGGDCGGDLVAPACGVLRNLVGVEEIKRFMVDEGAVSTFIKLVRSKEEAIQVNSIGFILSIASGDELVREMVIREGGIRALLRVLHPKWSYSCKTREVAMRAVEDLCFCSPSSVGVLMSYGFVDQLTYYIRNGEVSIQELALKVAFRLSGTSEEAKKAMGDAGFLPEFVKFLNAKSFEAREMAAEALSGMVTVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCTSGRKKIVSSEYAKNIEKLAEVSSEAKKLVKKLSTNRFRSMLNGIWHS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1746 565 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 565 - -
Vra7g1746 565 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 271 315 IPR000225 GO:0005515
Vra7g1746 565 SUPERFAMILY ARM repeat 140 517 IPR016024 -
Vra7g1746 565 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 565 - -
Vra7g1746 565 Gene3D - 147 554 IPR011989 -
Vra7g1746 565 SMART arm_5 345 388 IPR000225 GO:0005515
Vra7g1746 565 SMART arm_5 303 343 IPR000225 GO:0005515
Vra7g1746 565 SMART arm_5 432 472 IPR000225 GO:0005515
Vra7g1746 565 SMART arm_5 219 259 IPR000225 GO:0005515
Vra7g1746 565 SMART arm_5 177 218 IPR000225 GO:0005515
Vra7g1746 565 SMART arm_5 260 302 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1746 Vra-Chr7 36301865 36305165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1746 159 362 U-box Gene Family AT2G23140 24.510 4.71e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1746 - - gmx:100809382 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1746 7 36301865 36305165 Vra10g1382 10 19083799 19085840 PCT