Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1741 ATGACGTCACACTCTCACTACCAACCCGACTTAGACGCCGACTCCGTCACCTCCTCCCCTCGCTCCGACCATTTCCACGACGCGCCGCCGCGCGTCCGCTTCATGTGCAGTTTTGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGTTATGTCGGTGGCGACACTCGAATCGTCGCGGTCCACCGCTCTATCTCCTTCTCCGCCCTCATTCTCAAACTCTCTAAACTCTCAGGCATGACCAACATAACCGCGAAGTACCAGCTCCCGAACGAGGATCTGGACGCGTTAATCTCGGTCACGACGGATGAAGACGTGGAGAACATGATGGACGAGTACGACCGCGTGGCACAGAATCAGAACCCGCGATCGGCGCGGCTTCGGCTCTTCCTCTTCCCCGAAGGGGAAGACTCTCGAACCAGTAGCATCAGCTCGCTATTGAACGGCTCAGCCAAACGCGAGAACTGGTTCCTCGACGCACTAAACGGTGGCGTTTCGGGTCTCGAGCGTGGCCGCTCTGAAGCCTCTTCCATGGTCTCGGAAGTACCCGATTACCTCTTCGGATTAGACAACTCCGACGACACACACCAACGCGACCCACGACCCAAGGACCGACCCGTTCTCCAAGACAACGTTTCCGTTTCGGATCCGGGTTCTCCCGCCCCGGTTGTTTCCTCACCGTACTGTTCGACCTCATCAGCGCCCTGCGTTCCTTCTCTTCCGAACCTTCCTCCAGTAAAGACTAAACTTTCAAACTCAGTTGCTGATTCGGACTCCAAGGAAAATCAATTGGAACCTGAAACGGAACCTCAACCCAACCTCAACCAAAACCTCTACCCGGGTAACCCTGTAGTCCACTACCCCCAAGAATCTGCTTATTCTGCTCATACAGTAAACCCAGTTCCTGTTTTCTATGTTCCCGGTCCGGTTCGACCTGGAACTGTGCCGGTAACTATGCAGCAGACACCTTACCCCTACGTTCAACAACCATACCATGCAATGGTGCCATCTCAGGTTCCCATCGGCTACCATCATTTGATTCCGGGTTCGGGTCAAGTATATGGTGCAGGCGTGAGGCAGATGAGTCCACTGCAACCTTACAATCCTTCCACCGGAGTGGTTCCCGACGGTTTGAAACAGCACGTGTATCATGCAGTGCCGAATTCCGGTCCAGTTCCCGTTCACCAGATGATGCCCATGAGCGGTGCTGATGAACTGCAGAGAGGTGGAGCGGAGTACGTGGTGGGTCGGGGCCCCAATTCGCTGAATAACTGA 1281 0.5566 MTSHSHYQPDLDADSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFSALILKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPEGEDSRTSSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSDDTHQRDPRPKDRPVLQDNVSVSDPGSPAPVVSSPYCSTSSAPCVPSLPNLPPVKTKLSNSVADSDSKENQLEPETEPQPNLNQNLYPGNPVVHYPQESAYSAHTVNPVPVFYVPGPVRPGTVPVTMQQTPYPYVQQPYHAMVPSQVPIGYHHLIPGSGQVYGAGVRQMSPLQPYNPSTGVVPDGLKQHVYHAVPNSGPVPVHQMMPMSGADELQRGGAEYVVGRGPNSLNN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1741 426 PANTHER OS05G0427100 PROTEIN-RELATED 5 420 - -
Vra7g1741 426 SMART PB1_new 46 136 IPR000270 GO:0005515
Vra7g1741 426 MobiDBLite consensus disorder prediction 1 16 - -
Vra7g1741 426 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 420 - -
Vra7g1741 426 Gene3D - 52 135 - -
Vra7g1741 426 MobiDBLite consensus disorder prediction 1 28 - -
Vra7g1741 426 MobiDBLite consensus disorder prediction 247 261 - -
Vra7g1741 426 MobiDBLite consensus disorder prediction 193 208 - -
Vra7g1741 426 CDD PB1_UP2 35 134 - -
Vra7g1741 426 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Vra7g1741 426 MobiDBLite consensus disorder prediction 187 284 - -
Vra7g1741 426 MobiDBLite consensus disorder prediction 214 239 - -
Vra7g1741 426 MobiDBLite consensus disorder prediction 268 284 - -
Vra7g1741 426 SUPERFAMILY CAD & PB1 domains 47 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1741 Vra-Chr7 36136234 36138006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1741 26 171 MAP Kinase Kinase Kinase AT5G57610 45.946 1.32e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1741 - - gmx:100803004 709.909