Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1734 ATGAACCAAACCNATAAGCATAAAATATGTATGCTAAGCTCCTTCATTCTACTCTTCACCTTCCATTTTTGTTCTTGTTCTGATACCATATCTGCTGACAAAGCCATCAGAGATGGCGAGCTTCTTGTTTCCAAAGGCAAAACCTTTGCTCTTGGATTTTTNAGTCCAGGAAAATCCAAATCCCGCTATGTGGGAATATGGTTCAACAACGTGAAAGAACAAACTGTTGTTTGGGTTGCAAACAGAGACACTCCCATCAATGACACCTCTGGGGTTCTCTCTATCAACCCAGATGGAAACCTAGTCCTCCACCACAACTATAGCACTAGTCCCATTTGGTCTACCAGTGTTTCACTCACACAATCAAATACCACTGCCACTAACGTCATAGCTCAACTCTCAGACCTAGCAAACCTTGCTCTGATTCTTAACGACACCAAAACTCTCATCTGGCAAAGCTTTGATCATCCCACAGACACCTTGATTCCATATCTAAGAATTGGTTTCGACAGAAGAGCTAACCAGAGTTGGATCCTCCAATCTTGGAAGACAGATGATGACCCCGGAACGGGTTCTTACACATTGGAATTGAGCAGCACTGGGAAGGCACAGTTGTTCTTGTATCACCAGAACCTTCCCCTGTGGCGAGGTGGATCATGGAACGGTGAGTTATTTATGGGTGTACCCAACATGAAAAGAGATTTGCTTACTTTTAATGTTTCTTTTACGGAAGAAGAAAACCTCGTAGCACTCTCGTTTAACCCGCGTGATAATTCCTTGATCACTTGGGTGGTGGTTCAGCAATCAGGTTTCTTTAACGTATTCACTTGGGATAACCAAAAGAATCAGTGGAACAGGTACTGGTCTGTGCCAATAAACCAATGTGATAACTATGGAACCTGTGGCTCAAACGGTAATTGTGACCCTTTGAACTTTGAGGAATTTCGGTGTACTTGTCTACCTGGGTTTGAACCCAAATCCCCACATGAATGGTACAATAACAGAGATGGGTCAGAAGGGTGCGTGAGGAAGAAAGGTGTATCCGTTTGTGGTAATGGAGAAGGGTTTGTGAAAATTGAAGGCTTAAAGCTTCCTGATACATCTGAGGCAACTGCCAAAGAGGGTTGGAGTTTGGATGAGTGTGAGAAAGATTGCTTGAGAAACTGCTCTTGCACTGCTTATGCAGTTCTTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGAAATTTAACAGACATACAAAAACTGAGTGATCAAGGTCAAGATTTATTTGTCCGTGTTGATGCAGAAGAACTAGCAAATTATAACAAAAAGACAAAAGGATTACGCGGTAAAACGAGGATTGCTGTAATTGTGACTGCTTCTGCAGTAGCAAGTATCATTATCCTCTTCGCTCTGTATTTCCGGTGGAAGAAGAAAACCAAAGATAAAGTAATGCAACATTTAGACCAACTTTCCCCTGGACATGACAACGGTATCCAAAGCAGCACGCATAGAAATCTTCCATTTTTCAGCCTTAAAGTGATAATGGAAGCCGCAAGAAATTTTGGTGATGAGAACAAGCTTGGGCAAGGTGGATTTGGTTCTGTCTACAAGGGCTGCCTAGCTAATGGACAAGAGATAGCAGTGAAAAGATTGTCTGAACATTCAGGTCAAGGGACAGAAGAGTTTAAAAACGAAGTTACATTGTTAGTTAAACTTCAACACAGAAATCTAGTGAGGCTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGTTAATTTATGAATATTTACCAAATAAAAGCTTGGACTTCTTCATATTCGATGAAAAGCGAAGGTCATCACTGACATGGGATAAGCGGTTTGAAATCATTTTGGGAATTGCTCGAGGTGTTCTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCAAGCAATGTGCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAAGCAAGGACGAGAAAAGTGGTCGGAACATATGGGTATATGGCACCAGAATATGCTATGGATGGACGGTATTCAACAAAATCTGATGTCTTTAGTTTCGGGGTCTTACTCTTGGAGATTATTGCTGGCAAGAGAAATACAGATTCTGAAAGGGGAAGATCCTCTCGAAATTTAATTGGACATGTGTGGTTACTTTGGACAGAAGGAAGGGCGTTGGATATAGTTGATTCAACACTGGGTGAGTCTTATTCTCCAGCTTTTGTTCTGAGGTGCATTCAGATTGGTCTATTGTGCGTGCAAGAAAATGCAGCAAATAGACCTTCATTGTCAGAAGTTGTTTTCATGCTAGGCAATGAAACAAGTCTTTCCCGTCCCAAAAAGCCAGCGTTTTTACTGAATGGAGATTTGGCCGAGTCATCATCAGGTGGGGGATCTTCAATAAATGAAGTAACAGCAACTACTGTCAGTGCTCGTTAG 2499 0.4158 MNQTXKHKICMLSSFILLFTFHFCSCSDTISADKAIRDGELLVSKGKTFALGFXSPGKSKSRYVGIWFNNVKEQTVVWVANRDTPINDTSGVLSINPDGNLVLHHNYSTSPIWSTSVSLTQSNTTATNVIAQLSDLANLALILNDTKTLIWQSFDHPTDTLIPYLRIGFDRRANQSWILQSWKTDDDPGTGSYTLELSSTGKAQLFLYHQNLPLWRGGSWNGELFMGVPNMKRDLLTFNVSFTEEENLVALSFNPRDNSLITWVVVQQSGFFNVFTWDNQKNQWNRYWSVPINQCDNYGTCGSNGNCDPLNFEEFRCTCLPGFEPKSPHEWYNNRDGSEGCVRKKGVSVCGNGEGFVKIEGLKLPDTSEATAKEGWSLDECEKDCLRNCSCTAYAVLDVRNGGSGCLAWHGNLTDIQKLSDQGQDLFVRVDAEELANYNKKTKGLRGKTRIAVIVTASAVASIIILFALYFRWKKKTKDKVMQHLDQLSPGHDNGIQSSTHRNLPFFSLKVIMEAARNFGDENKLGQGGFGSVYKGCLANGQEIAVKRLSEHSGQGTEEFKNEVTLLVKLQHRNLVRLLGCCFEKEERMLIYEYLPNKSLDFFIFDEKRRSSLTWDKRFEIILGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQARTRKVVGTYGYMAPEYAMDGRYSTKSDVFSFGVLLLEIIAGKRNTDSERGRSSRNLIGHVWLLWTEGRALDIVDSTLGESYSPAFVLRCIQIGLLCVQENAANRPSLSEVVFMLGNETSLSRPKKPAFLLNGDLAESSSGGGSSINEVTATTVSAR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1734 832 Gene3D Phosphorylase Kinase; domain 1 493 594 - -
Vra7g1734 832 SMART blect_4 33 157 IPR001480 -
Vra7g1734 832 PANTHER - 9 829 - -
Vra7g1734 832 MobiDBLite consensus disorder prediction 813 832 - -
Vra7g1734 832 SUPERFAMILY Protein kinase-like (PK-like) 501 793 IPR011009 -
Vra7g1734 832 PIRSF SRK 2 832 IPR024171 GO:0004674
Vra7g1734 832 Pfam PAN-like domain 350 416 IPR003609 -
Vra7g1734 832 ProSiteProfiles Bulb-type lectin domain profile. 27 154 IPR001480 -
Vra7g1734 832 SMART serkin_6 519 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1734 832 CDD STKc_IRAK 525 790 - -
Vra7g1734 832 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Vra7g1734 832 Pfam Protein tyrosine and serine/threonine kinase 523 786 IPR001245 GO:0004672|GO:0006468
Vra7g1734 832 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1734 832 Gene3D Transferase(Phosphotransferase) domain 1 595 801 - -
Vra7g1734 832 Gene3D - 22 155 IPR036426 -
Vra7g1734 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Vra7g1734 832 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 9 829 - -
Vra7g1734 832 Gene3D Hepatocyte Growth Factor 348 428 - -
Vra7g1734 832 Pfam S-locus glycoprotein domain 215 327 IPR000858 GO:0048544
Vra7g1734 832 ProSiteProfiles PAN/Apple domain profile. 350 431 IPR003609 -
Vra7g1734 832 ProSiteProfiles EGF-like domain profile. 291 329 IPR000742 -
Vra7g1734 832 Pfam D-mannose binding lectin 75 183 IPR001480 -
Vra7g1734 832 CDD B_lectin 36 157 IPR001480 -
Vra7g1734 832 CDD PAN_AP_plant 351 430 - -
Vra7g1734 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 188 IPR036426 -
Vra7g1734 832 SMART ntp_6 351 430 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1734 Vra-Chr7 36039129 36043232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1734 472 808 Receptor kinase-like Gene Family AT4G11530 56.342 1.04e-125 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vra7g1734 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1734 - - aprc:113859914 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1734 7 36039129 36043232 Vra10g1402 10 19219928 19224838 PCT