Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1733 ATGCACCATGCTAAAACTCTTCCAACCTTTGTCATGACTCAATACCACAAGCATAGCATCTACCTGCTCTGCGCTAAGATTCTACTATTCAGCTTCTCCTTTTGCTCTTCTTCTGATACCATAGTTGCTGACAAAGGCATCAGAGATGGAGAGCTTCTTGTTTCAAAAGCCCAAACATTTGCTCTTGGATTCTTCAGTCCAGTCAAGTCCAACTTCCGCTATTTGGGAATATGGTACAACAATGTGCAAGAACAAACTGTTGCTTGGGTTGCAAACAGAAACACTCCAATCAATGACACTTCTGGGTTTCTCTCAATCAACCCAGATGGAAACCTAGTACTCCAACACAAATATAGCACCTTTCCAGTTTGGTCTACTAATATTTCAAATGCTCAATCAAACAGCACCAAAGTCATGGCTAAACTCACAGATATAGGTAATCTTGTTCTGATTCTTGACAACACCAAAGCTGTCATCTGGCAAAGCTTTGATCATCCCACAGATACCTTTCTTCAATATCTAAGGCTTGGTTTCGACAGAAGAACAAACCAGAGTTGGTTCCTCCAATCTTGGAAGACAGATGATGATCCTGGAGCAGGTCCTTACACATTGAAAATAAGCAGCACTGGGAAACCCCAGATGATGTTTTACCACCAGAACCTTCCCTTTTGGCGAGGCGGATCGTGGAACGGAGAATTATTTATGGGTATGCCCGACATGAAGAGAGATATGTATACTTTTAACGTTTCTTATATAGAAGATGATAACCAGGCAGTGCTCTCATATAACATGGTTGATCGGTCCGTGATCTCTAGGGTAGTAGTTCAACCATCAGGTTTCTTTCAAGTATTCACTTGGGATAACCAAAAGAGTCAATGGAATAGGTACTGGTCTGAACCAACAAATCAGTGTGATAACTATGGAACCTGTGGATCAAACGGTAATTGTGACCCTTTGAACTTTGAGGAATTTCGGTGTTCTTGTCTACCTGGGTTTGAACCCAAATCCCCGCACGAGTGGTACGATAACAGAGATGGATCAGAAGGGTGCGTGAGGAAGAAAGGTGTATCCGTTTGTGGGAATGGAGAAGGGTTTGTGAAAGTTGAAGGATTAAAGCTCCCTGATACCTCTGAGGCAACTGCCAAAAAGGGTTGGAGTTTGGATGAGTGTGAGAAGGATTGCTTGAGAAACTGCTCTTGCACTGCTTATGCAGTTCTTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGAAATTTAATAGACATACAAAAACTGAGTGATCAAGGCCAAGATTTATTTGTTCGAGTTGATGCAGTCGAACTAGCAAATTATAACAAAAAAAGAAAAGGAGTGCGCGGTAAAAAGAGTATGGTTGCAATTCCGACTGCTTCAGTACTGACAAGTGTTATTCTTTTCTCCTGTGTATATTACATGTGGAAGAGAAAAAGCAAAGATAAAGTGAGGCAACATTTAAACCAATTTTCCCCTGAAGACGACCACGATATCCCAAGCAACACACATCCAAATCTTCCCTTTTTCAGCCTTAAAGTAATAGTGGAAGCCACAAGAAATTTTGGTGATGAGAACAAGCTTGGGCAAGGTGGATTTGGTTCTGTCTACAAGGGCTGCCTAGCTAATGGACAAGAGATAGCAGTGAAAAGATTGTCGGAACATTCAGGTCAAGGGACAGAAGAGTTTAAAACTGAAGTTAGATTATTAGTTAAACTTCAACACAGAAATCTAGTGAGGCTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGTTAGTTTATGAATATTTACCAAATAAAAGCTTGGACTTCTTCATATTCGATGAAGAGCGAAGGTCATCGCTGACTTGGGATAAGCGGTTTGAAATCATTTTGGGGATTGCTCGAGGCGTTCTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCAAGCAATGTACTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTCGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAAGCAAGGACGAGAAGAGTGGTCGGAACATACGGTTATATGTCACCAGAATATGCAATGGATGGACGGTATTCAACAAAATCTGATGTCTTTAGTTTTGGAGTCTTACTCCTGGAGATTATTGCTGGCAAGAGAAATACAGATTGTGAAAAGGGAAGATCCTCCCCAAATTTAATCGGACATGTGTGGTTACTTTGGACAGAAGGAATGGCCTTGGACATAGTTGATTCAACACTGCCTCAGTCTTACTCTCCAGCTCTTGTTCTGAGGTGCATTCAAATTGGTCTATTGTGCGTTCAAGAAAATGCAGAGAATAGACCTTCCTTGTCGGAAGTTGCTTTTATGCTGAGCAATGAAACACCTCTTTCCCCACCCCAAAAGCCAGCATTTTTATTCCATGGAGACAGAGATCGGCCTGAGTCATCAACATCAGGGGGAGGATCTTCAATAAATGAAGTAACAGTAACCACCATCAGCGCCCGCTAG 2535 0.4158 MHHAKTLPTFVMTQYHKHSIYLLCAKILLFSFSFCSSSDTIVADKGIRDGELLVSKAQTFALGFFSPVKSNFRYLGIWYNNVQEQTVAWVANRNTPINDTSGFLSINPDGNLVLQHKYSTFPVWSTNISNAQSNSTKVMAKLTDIGNLVLILDNTKAVIWQSFDHPTDTFLQYLRLGFDRRTNQSWFLQSWKTDDDPGAGPYTLKISSTGKPQMMFYHQNLPFWRGGSWNGELFMGMPDMKRDMYTFNVSYIEDDNQAVLSYNMVDRSVISRVVVQPSGFFQVFTWDNQKSQWNRYWSEPTNQCDNYGTCGSNGNCDPLNFEEFRCSCLPGFEPKSPHEWYDNRDGSEGCVRKKGVSVCGNGEGFVKVEGLKLPDTSEATAKKGWSLDECEKDCLRNCSCTAYAVLDVRNGGSGCLAWHGNLIDIQKLSDQGQDLFVRVDAVELANYNKKRKGVRGKKSMVAIPTASVLTSVILFSCVYYMWKRKSKDKVRQHLNQFSPEDDHDIPSNTHPNLPFFSLKVIVEATRNFGDENKLGQGGFGSVYKGCLANGQEIAVKRLSEHSGQGTEEFKTEVRLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDEERRSSLTWDKRFEIILGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQARTRRVVGTYGYMSPEYAMDGRYSTKSDVFSFGVLLLEIIAGKRNTDCEKGRSSPNLIGHVWLLWTEGMALDIVDSTLPQSYSPALVLRCIQIGLLCVQENAENRPSLSEVAFMLSNETPLSPPQKPAFLFHGDRDRPESSTSGGGSSINEVTVTTISAR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1733 844 Gene3D Hepatocyte Growth Factor 357 437 - -
Vra7g1733 844 ProSiteProfiles PAN/Apple domain profile. 359 440 IPR003609 -
Vra7g1733 844 SMART serkin_6 528 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1733 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 197 IPR036426 -
Vra7g1733 844 CDD B_lectin 47 166 IPR001480 -
Vra7g1733 844 SUPERFAMILY Protein kinase-like (PK-like) 509 815 IPR011009 -
Vra7g1733 844 Gene3D Phosphorylase Kinase; domain 1 489 603 - -
Vra7g1733 844 Gene3D Transferase(Phosphotransferase) domain 1 604 806 - -
Vra7g1733 844 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 23 841 - -
Vra7g1733 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Vra7g1733 844 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Vra7g1733 844 CDD PAN_AP_plant 360 439 - -
Vra7g1733 844 Pfam D-mannose binding lectin 86 192 IPR001480 -
Vra7g1733 844 MobiDBLite consensus disorder prediction 824 844 - -
Vra7g1733 844 ProSiteProfiles Bulb-type lectin domain profile. 38 163 IPR001480 -
Vra7g1733 844 ProSiteProfiles Protein kinase domain profile. 528 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1733 844 Pfam Protein tyrosine and serine/threonine kinase 532 795 IPR001245 GO:0004672|GO:0006468
Vra7g1733 844 SMART ntp_6 360 439 IPR003609 -
Vra7g1733 844 SMART blect_4 44 166 IPR001480 -
Vra7g1733 844 Pfam S-locus glycoprotein domain 224 336 IPR000858 GO:0048544
Vra7g1733 844 PIRSF SRK 10 844 IPR024171 GO:0004674
Vra7g1733 844 MobiDBLite consensus disorder prediction 814 844 - -
Vra7g1733 844 Gene3D - 34 164 IPR036426 -
Vra7g1733 844 Pfam PAN-like domain 359 425 IPR003609 -
Vra7g1733 844 PANTHER - 23 841 - -
Vra7g1733 844 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Vra7g1733 844 CDD STKc_IRAK 534 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1733 Vra-Chr7 36030455 36034803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1733 516 844 Receptor kinase-like Gene Family AT4G11530 56.805 1.49e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vra7g1733 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1733 - - aprc:113859914 1325.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1733 7 36030455 36034803 Vra10g1403 10 19226359 19229884 PCT