Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra7g1714 | ATGGGTAAGTCACCTGGAAAATGGATCAAAACCGTACTGTTTGGGAAAAAGTCATCCAAATCCAATATTTCAAAAGGCAGAGAGAAGCTTGTTAATAAAAAAGAAGGAGTAATAGTTACCTCCAAGGTGCCGGAAACGGGTTTGACCTTAGAACCAACCTCAGATGCTATTCCCAATCGCGATGAAGTCCAGGAGGTGGAAAACAAAGAAGCAGAAAATGTTTTACCTGACAATCAAGAAATAGACTTAGTAGGATCTACTAATGAAGAGGATGCATTGGATCCGGAGAAAATGAGGCTGGAGGAAGCAGCAACAAAGGCACAAGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGGGCCTTGAAAGGCATAATAAGGCTGCAAGCACTCATTCGTGGGCACTTGGTTAGGAGACAGGCTGTTGTTACATTATGCACTATGTATGGTATTGTCAAGTTTCAAGCACTTGTTCGAGGAGGAAGAGTTAGGCAGTCTAATGTTGGTTCTGAAATCCATGAGAAGTACAATATATTGAACCCTCTGGATGGAAAATTTGTCAAGCCAATTGCTATATCCGCAAAAATTACAAAGCTGTCAGCAAATGCATTCATTCTTAAGCTTTGTACTTCGTCAACTACAATAATGGCATTGCGTTTGCAATATGTTCCGGGTGATCCAAATTCAGTCCTCAGTTGGTTGGAGCGTTGGTCAGCGTCTCAATTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCAGGATAGTAAGGCTCAAAGAAAGCATGGCAATATTTCAGTTGGAGATACTCAAACGAGTAAGTCAAAACGTACTAACAGGAAGCTTCCTACTTCGAATTTTGACTCGGTCCCAGTGCTAGCAAATCCTGAATTTGAGAAACCTAAAAGAAACACAAGGAAAATTCCAAGTCAACCCTCAGATCCCGTGCAGGAAAATCCACAAAATGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGGTTCATAATCCTGTTGCTGAGAAAGCTGTTCCTTCAGAAGTTGAAACTGAGATGCCAAAGGAACATTTGGAAAAGTCCACAGTTACCTCATCCCTTGCTGTTTCAGAACAAGAGGTCGTTAGTTCTAATGAGAAGGTCAAGAAGGAAGCAGCATTTACTGTTTCCAGTGTGCAAGATATAGAAGCTACCCCAAGACTTTCAGCTAGTAACGAAATGCTTGACACACCAACCAGTAATCAAGTGACTGTGGAATCGAAGCCCTTGACTGAAATTACAACTAAAGATAAAAATATTTCCGATGAAGTAAAAAATGAGCCCATAGATTTGCCAGAGCTTATTTGTAGAGATGAAAATTCTCTCTTGACAAATGGAGATTTGAGTCACAAGGAAGATCCAATAGGCAGTGAAAACCAGAAACCGAACAGAAAAGGCTCTAATGTAGCAAAACAGGATCGTGCAGATAATGGAATACAGAATAGTCCAACATTGCCAAGTTACATGGCAGCAACTGAATCTGCAAAGGCAAAGTTAAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAAAGAAACAACCAGACCCGACGCCATTCTTTGCCATCCTCAACTAACAGCAAAATTAGTTCGCATTCACCCAGGACACACAGACCAGTTCATTCAGGTGGCAAAGGGGGCAACAGAAGTGACAGAACTGTATCATCATCTTCTAGAGATGGGAATGGAAAGGTAATTCAAGCCGAGTGGAGGAGGTAA | 1758 | 0.4164 | MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNKKEGVIVTSKVPETGLTLEPTSDAIPNRDEVQEVENKEAENVLPDNQEIDLVGSTNEEDALDPEKMRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCTMYGIVKFQALVRGGRVRQSNVGSEIHEKYNILNPLDGKFVKPIAISAKITKLSANAFILKLCTSSTTIMALRLQYVPGDPNSVLSWLERWSASQFWKPVPQPKKIQDSKAQRKHGNISVGDTQTSKSKRTNRKLPTSNFDSVPVLANPEFEKPKRNTRKIPSQPSDPVQENPQNELEKVKRNLRKVHNPVAEKAVPSEVETEMPKEHLEKSTVTSSLAVSEQEVVSSNEKVKKEAAFTVSSVQDIEATPRLSASNEMLDTPTSNQVTVESKPLTEITTKDKNISDEVKNEPIDLPELICRDENSLLTNGDLSHKEDPIGSENQKPNRKGSNVAKQDRADNGIQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNNQTRRHSLPSSTNSKISSHSPRTHRPVHSGGKGGNRSDRTVSSSSRDGNGKVIQAEWRR* | 586 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 561 | 576 | - | - | |
| Vra7g1714 | 585 | Pfam | Protein of unknown function (DUF4005) | 483 | 563 | IPR025064 | - | |
| Vra7g1714 | 585 | PANTHER | PROTEIN IQ-DOMAIN 31 | 1 | 570 | - | - | |
| Vra7g1714 | 585 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 570 | - | - | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 519 | 546 | - | - | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 396 | 421 | - | - | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 342 | 362 | - | - | |
| Vra7g1714 | 585 | Gene3D | - | 97 | 148 | - | - | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 484 | 500 | - | - | |
| Vra7g1714 | 585 | Pfam | IQ calmodulin-binding motif | 124 | 141 | IPR000048 | GO:0005515 | |
| Vra7g1714 | 585 | Pfam | IQ calmodulin-binding motif | 102 | 121 | IPR000048 | GO:0005515 | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 422 | 445 | - | - | |
| Vra7g1714 | 585 | SMART | iq_5 | 122 | 143 | IPR000048 | GO:0005515 | |
| Vra7g1714 | 585 | SMART | iq_5 | 99 | 121 | IPR000048 | GO:0005515 | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 396 | 585 | - | - | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 260 | 291 | - | - | |
| Vra7g1714 | 585 | ProSiteProfiles | IQ motif profile. | 124 | 151 | IPR000048 | GO:0005515 | |
| Vra7g1714 | 585 | MobiDBLite | consensus disorder prediction | 249 | 322 | - | - | |
| Vra7g1714 | 585 | ProSiteProfiles | IQ motif profile. | 100 | 128 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vra7g1714 | Vra-Chr7 | 35722927 | 35733473 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra7g1714 | 1 | 585 | IQD Protein Family | AT1G74690 | 43.322 | 3.35e-122 | 371 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra7g1714 | - | - | gmx:100794636 | 961.444 |