LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra7g1710	ATGTTGAAGCTTTTGGTTAGTAGAGCAGCTAGGGTTTCGACTTCGCGCAACCACAACGGTTTTGCTGCATTCACTTTCTCTAGATGTGTTCATTCATTGCAATTTGCAACTGTAGAAGCAGAAGAGATATCGGGTTCTAAGCCTGCTGAAGTTTTGAATCTGGTGCAAGGTAAATGGGTAGGGTCTTCAAAGTGGAATACAATTGTAGATCCCCTAAATGGAGACTCATTTATTAATATTGCTGAAGTTGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGCATGGTGTACACAATCCTTTTAAGGCACCAGAGCGATATCTCATGTATGGAGATATATCTACTAAGGCAGCTCACATGCTATCTCTTCCTAAGGTTTCAGATTTTTTCACAAGGTTAATTCAAAGAGTTTCTCCAAAGAGCTACCAGCAGGCTTTTGGGGAAGTGTACGTGACACAAAAGTTTCTAGAGAACTTTTGCGGGGATCAGGTTCGTTTCCTAGCAAGGTCTTTTGGCGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTTCTTCAATTGATGGGTGCACTTTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTGCGCCTGCTTCATTCTTGTGGCTTACCTGTGGAAGATGTTGACTTCATAAATTCAGATGGGAAGACAATGAACAAGCTGTTGCTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAAAAGTTGGCGGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACATTGCGTGGGTATGTGATCAAGATGCATATGCGTGCAGTGGTCAGAAATGCTCGGCTCAGTCATTATTATTTATGCATGAGAACTGGTCTAAAACTTCGTTGCTATCAAAGTTGAAAGATCTTGCAGAAAGAAGAAAGCTGACAGACTTGACAATCGGCCCAGTCCTCACAGTTACTACTGATTCAATGCTTGAACATGTCAATAAATTGCTTGAGATACCCGGATCAAAGCTGCTTTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCGATTAAACCAACAGCTGTTTATGTTCCTCTTGAAGAAATTATGAAAGATAAGAATTTTGAGCTTGTGACAAAAGAAATATTTGGACCGTTTCAGGTTATTACTGATTACAAAAATAGCGAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACGGCTGCTGTAGTTTCAAACGATCCTTTATTTTTGCAGGAAGTTATTGGGAAGTCGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACTACCGGAGCACCACAGAATCACTGGTTTGGACCCGCCGGTGATGCAAGAGGCGCGGGAATTGGAACACCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATTATGGGCCGGTGCCAAAGAATTGGGAAATTCCTCCATCCACTTGA	1662	0.42	MLKLLVSRAARVSTSRNHNGFAAFTFSRCVHSLQFATVEAEEISGSKPAEVLNLVQGKWVGSSKWNTIVDPLNGDSFINIAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHSCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQVITDYKNSELSVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREVIYDYGPVPKNWEIPPST*	554

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra7g1710	553	Pfam	Aldehyde dehydrogenase family	131	495	IPR015590	GO:0016491
	Vra7g1710	553	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	44	303	IPR016162	GO:0016491
	Vra7g1710	553	PANTHER	ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED	17	552	-	-
	Vra7g1710	553	SUPERFAMILY	ALDH-like	53	500	IPR016161	GO:0016491
	Vra7g1710	553	PANTHER	ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE	17	552	IPR044638	GO:0004029
	Vra7g1710	553	ProSitePatterns	Aldehyde dehydrogenases cysteine active site.	327	338	IPR016160	GO:0016491
	Vra7g1710	553	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	304	494	IPR016163	GO:0016620

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra7g1710	1	553	Aldehyde Dehydrogenase Gene Family	AT5G62530	79.137	0.0	954

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra7g1710	K00294		-	gmx:100806579	1053.12

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra7g1710	7	35677799	35685509	Vra7g1710	7	35677799	35685509	ECH

Showing 1 to 1 of 1 entries