Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1710 ATGTTGAAGCTTTTGGTTAGTAGAGCAGCTAGGGTTTCGACTTCGCGCAACCACAACGGTTTTGCTGCATTCACTTTCTCTAGATGTGTTCATTCATTGCAATTTGCAACTGTAGAAGCAGAAGAGATATCGGGTTCTAAGCCTGCTGAAGTTTTGAATCTGGTGCAAGGTAAATGGGTAGGGTCTTCAAAGTGGAATACAATTGTAGATCCCCTAAATGGAGACTCATTTATTAATATTGCTGAAGTTGACGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAGCATGGTGTACACAATCCTTTTAAGGCACCAGAGCGATATCTCATGTATGGAGATATATCTACTAAGGCAGCTCACATGCTATCTCTTCCTAAGGTTTCAGATTTTTTCACAAGGTTAATTCAAAGAGTTTCTCCAAAGAGCTACCAGCAGGCTTTTGGGGAAGTGTACGTGACACAAAAGTTTCTAGAGAACTTTTGCGGGGATCAGGTTCGTTTCCTAGCAAGGTCTTTTGGCGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCTGTTCTTCAATTGATGGGTGCACTTTATATGGGCAACAAACCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTCATGGAACAAATGTTGCGCCTGCTTCATTCTTGTGGCTTACCTGTGGAAGATGTTGACTTCATAAATTCAGATGGGAAGACAATGAACAAGCTGTTGCTGGAGGCAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCTGAAAAGTTGGCGGTTGATTTGAAGGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCATCAGGAAGATTACATTGCGTGGGTATGTGATCAAGATGCATATGCGTGCAGTGGTCAGAAATGCTCGGCTCAGTCATTATTATTTATGCATGAGAACTGGTCTAAAACTTCGTTGCTATCAAAGTTGAAAGATCTTGCAGAAAGAAGAAAGCTGACAGACTTGACAATCGGCCCAGTCCTCACAGTTACTACTGATTCAATGCTTGAACATGTCAATAAATTGCTTGAGATACCCGGATCAAAGCTGCTTTTCGGAGGTCGACCTTTGGAGGATCATTCAATTCCGTCTATTTATGGTGCGATTAAACCAACAGCTGTTTATGTTCCTCTTGAAGAAATTATGAAAGATAAGAATTTTGAGCTTGTGACAAAAGAAATATTTGGACCGTTTCAGGTTATTACTGATTACAAAAATAGCGAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACGGCTGCTGTAGTTTCAAACGATCCTTTATTTTTGCAGGAAGTTATTGGGAAGTCGGTAAATGGTACTACTTATGCTGGTTTAAGAGCAAGGACTACCGGAGCACCACAGAATCACTGGTTTGGACCCGCCGGTGATGCAAGAGGCGCGGGAATTGGAACACCAGAGGCCATAAAACTTGTATGGTCTTGTCACAGAGAAGTTATCTATGATTATGGGCCGGTGCCAAAGAATTGGGAAATTCCTCCATCCACTTGA 1662 0.42 MLKLLVSRAARVSTSRNHNGFAAFTFSRCVHSLQFATVEAEEISGSKPAEVLNLVQGKWVGSSKWNTIVDPLNGDSFINIAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHSCGLPVEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLTDLTIGPVLTVTTDSMLEHVNKLLEIPGSKLLFGGRPLEDHSIPSIYGAIKPTAVYVPLEEIMKDKNFELVTKEIFGPFQVITDYKNSELSVVLDALERMHNHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREVIYDYGPVPKNWEIPPST* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1710 553 Pfam Aldehyde dehydrogenase family 131 495 IPR015590 GO:0016491
Vra7g1710 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 303 IPR016162 GO:0016491
Vra7g1710 553 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 17 552 - -
Vra7g1710 553 SUPERFAMILY ALDH-like 53 500 IPR016161 GO:0016491
Vra7g1710 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 17 552 IPR044638 GO:0004029
Vra7g1710 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Vra7g1710 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 494 IPR016163 GO:0016620
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1710 1 553 Aldehyde Dehydrogenase Gene Family AT5G62530 79.137 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1710 K00294 - gmx:100806579 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1710 7 35677799 35685509 Vra7g1710 7 35677799 35685509 ECH