Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1699 ATGGGGATTGTAACATGCATTTCTCTGGTGATTATGGTCACAGTTTTCTGCCCTTCTTCCCTTGCTCTCACCCTGGATGGTCTGACCTTGTTGGAAATAAAAAGTGCTTTGAATGATACTAAGAATGCTCTGAGCAACTGGCAAGAGTTTGATGAGACTCCTTGTAGATGGACTGGTATCTCTTGCCACCCTGGCGATGACCAAAGAGTTAGCTTCATAAATCTTCCATACATGCAACTTGAAGGAATTTTATCTCCCAGCATTGGTAAACTCAGTGGACTACAAAGACTGGCACTTCATGAGAACAGCTTGCATGGAACCATTCCTAATGAACTTACCAACTGTTCTGATCTAAGAGCACTGTACTTGAGGGGTAACTTTTTCCAAGGAGGCATACCGTCAAACATTGGAAATCTTTCATCTTTGAATATATTGGATTTATCGGGTAACTCATTGAAAGGTGCCATACCTTCCTCTATTGGCCGTCTCTCACAGTTGCAAATTCTGAACTTGACTACCAATTTCTTTTCTGGTGAAATTCCTGACATTGGAGTACTCAGCACCTTTAGCAAACACTCGTTTGAGGGAAATTCAGATCTTTGTGGGCGGCAAATCGAAAAGCCATGTCGGACATCACTTGGTTTTCCTGTGGTGCTCCCCCATGCTGAAAGTGATCAAGCCGCAGTCCCTGCCAAAAGGTCTTCAGGTTACATGAAGGTACTGTTATTTTATGCAATTGCAATTATGGGTGTCGCACTTGTCATGGTGCTTTCATTTCTGTGGACTCGTTTGATATCAAAGAAAGAACGAGCTGCAAAGAGATACACGGAAGTCAAGAAACAAGTTCATCCAGTAACAAGCGCAAAATTTATTACATTCCATGGTAATCTGCGACACACATCGTCTCAGATCATAGAGAAGCTGGAGTCTCTAAATGAAGAGAATTTATTAGGATCCGGAGGATATGGTACTGTTTACCTAATGGAGATGAATGATGGTGGTCTATATGCTGTTAAACGGATTGATCGAAGTTGTGAAGTGTCCGATCAAGTGTTTGAAAGGGAACTCGAGATCTTGGGGAGCATCAGACACATAAATCTTGTAAATATGCGTGCTTACTGCAGGCTTGGTTCTTCAAGATTCCTTATCTATGAATATTTGGTCTTAGGCAGCTTAGATGATGCCTTGAATGAAAATACTCAAGAAATCGTACTACCGCACTGGAGTGATCGCCTAAGGATAGCTCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCACCATGAATGCAGCCCAGAAATTGTTCACGGTAATATAAAATCTAGAAACATACTCCTTGATGAATGCATGGACCCACATATATCCGACCTTGGCCTTGCAAAGCTTTTGCTCGATGAGGAGGCACATGTTACCACAGTGGTAGCTGGCACATTTGGTTATTTGGCACCAGAGTATCTACAAAGTGGAAGAGCAACTGTGAAGTCGGATGTGTATAGCTTTGGAGTTCTTTTATTCGAACTTGTAACTGGGAAGAGGCCAACGGATCCTTCTTTTGTGAGAAGAGGTTTAAATGTTGTTAGTTGGGTGAACACATTACTGAGAGATAACAAATTGAACGAGGTGGTGGACAAAAGATGCAAAGGTGTAGATGAAGGAACCCTTAAAATTATTCTTGAGCTAGCAGCAAGATGCACAGATGGAAATGCAGATGATCGTCCATCAATGAACCAGGTGTTACAGTTGCTGAAACAAGAGGCTATGCCTCCTCAATTCCAGTTTTGTGAGTCTGATTCAGATTACTGA 1800 0.4228 MGIVTCISLVIMVTVFCPSSLALTLDGLTLLEIKSALNDTKNALSNWQEFDETPCRWTGISCHPGDDQRVSFINLPYMQLEGILSPSIGKLSGLQRLALHENSLHGTIPNELTNCSDLRALYLRGNFFQGGIPSNIGNLSSLNILDLSGNSLKGAIPSSIGRLSQLQILNLTTNFFSGEIPDIGVLSTFSKHSFEGNSDLCGRQIEKPCRTSLGFPVVLPHAESDQAAVPAKRSSGYMKVLLFYAIAIMGVALVMVLSFLWTRLISKKERAAKRYTEVKKQVHPVTSAKFITFHGNLRHTSSQIIEKLESLNEENLLGSGGYGTVYLMEMNDGGLYAVKRIDRSCEVSDQVFERELEILGSIRHINLVNMRAYCRLGSSRFLIYEYLVLGSLDDALNENTQEIVLPHWSDRLRIALGSARGLAYLHHECSPEIVHGNIKSRNILLDECMDPHISDLGLAKLLLDEEAHVTTVVAGTFGYLAPEYLQSGRATVKSDVYSFGVLLFELVTGKRPTDPSFVRRGLNVVSWVNTLLRDNKLNEVVDKRCKGVDEGTLKIILELAARCTDGNADDRPSMNQVLQLLKQEAMPPQFQFCESDSDY* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1699 599 CDD STKc_IRAK 317 583 - -
Vra7g1699 599 SUPERFAMILY Protein kinase-like (PK-like) 295 581 IPR011009 -
Vra7g1699 599 Gene3D Phosphorylase Kinase; domain 1 270 386 - -
Vra7g1699 599 Pfam Protein kinase domain 313 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1699 599 SUPERFAMILY L domain-like 26 189 - -
Vra7g1699 599 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Vra7g1699 599 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Vra7g1699 599 Gene3D Transferase(Phosphotransferase) domain 1 388 593 - -
Vra7g1699 599 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 591 - -
Vra7g1699 599 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 34 591 - -
Vra7g1699 599 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Vra7g1699 599 ProSiteProfiles Protein kinase domain profile. 311 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1699 Vra-Chr7 35593305 35597442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1699 9 588 Receptor kinase-like Gene Family AT2G35620 44.828 5.22e-171 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Vra7g1699 Pkinase 6.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1699 - - gmx:100803920 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1699 7 35593305 35597442 Vra7g1699 7 35593305 35597442 ECH