Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1690 ATGACCCTTAAGGGTGGCACAACCCAAGCCTGTGCGGCATGCAAACATCAGAGGAGAAAATGCACTTCTGAATGCCTTCTTGCACCCTACTTCCCCGCAGACCAACCCAAGGTTTTTCTCAATGTCCACAGGCTTTTTGGAGTCAGCAACATCGTTAAGATATTGAAGATTTTGGAGCCTAACCAGAAGAAAATAGCCATGGACTCTATCATTATTCAAGCTAATTATAGAGATAAGTATCCTGTGCATGGCTGTTGGGAAGAGATTTGTAGGTTACAATATCAAATATGGCTTGCAGAAGAAGAGCTTCATGCAGTTTATCAACAGCTTCAAATATGTAGGCAGCAACAACAACATCCTCCCATGCCGGATGATGTTACTTCACAATTAGAATTGGGCATGACACCATGTACTAACAATAATGCACTCCCATTGTTTAATCATCATACTCCACAACCAAACACTTACAACAATAATGTCACTGCATTCTCTGTGTCACAGCAACATTCCTATTCCAACAGTAACAGTATGGATTATAGCTCCCTCTACTTAGATTCCAAGGATAATGCCATGAATCCTTTGTGGGTTCAGTACCCTTGTTCAAATAATGACCATTCTGTAGGAATGCTTTCTTCACAGCCATTGCCCATTCAACAAAATGTTGTTGAGGATTATGTTGACATGCCTCCCATTTTTGATTCACTTGATGATAGACAATCCTACATTTATTCCAAGGAAGCTTACGAGTCAAGTTCAGAGGAATCACTGAAAGACATAAGAAAGTGCACAGAGGATGTTTCTGAGAATGAATTGAAGAGTGCTGCTGCCTGCTTTAGCCTTACCAGTGTCAACTAG 855 0.4094 MTLKGGTTQACAACKHQRRKCTSECLLAPYFPADQPKVFLNVHRLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQYQIWLAEEELHAVYQQLQICRQQQQHPPMPDDVTSQLELGMTPCTNNNALPLFNHHTPQPNTYNNNVTAFSVSQQHSYSNSNSMDYSSLYLDSKDNAMNPLWVQYPCSNNDHSVGMLSSQPLPIQQNVVEDYVDMPPIFDSLDDRQSYIYSKEAYESSSEESLKDIRKCTEDVSENELKSAAACFSLTSVN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1690 284 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Vra7g1690 284 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 189 - -
Vra7g1690 284 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Vra7g1690 284 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1690 Vra-Chr7 35481184 35482929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1690 1 134 AS2 family AT3G47870 55.128 2.47e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vra7g1690 LOB 9.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1690 - - lang:109357116 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1690 7 35481184 35482929 Vra7g1690 7 35481184 35482929 ECH