Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1688 ATGAGAAGCGCAGTTGATGTTCTNGATGATGGGTACCAGTGGAGAAAATNTGGGAAAAAGATAGTAAAAAACAATAGTTTTCCAAGGTTGGACAGATCTTTCAAAAAATTGAATGTCGTGATCAATCTAATGGAGGAACAAGAAGGTGCTACACTGCTTGTATCCGCCAAGTTTAATGTAGTATCTGTCCGTATATACCTTCAGTTTCAAGAGGAAATTGTTGATGCAAAGTTCGGGTTTTCTTTGAGTACAAGAAGATTATCTCATGTTAGCAACATTTTGGGAGTTTATTATATTTTTTAG 303 0.3531 MRSAVDVLDDGYQWRKXGKKIVKNNSFPRLDRSFKKLNVVINLMEEQEGATLLVSAKFNVVSVRIYLQFQEEIVDAKFGFSLSTRRLSHVSNILGVYYIF* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1688 100 Gene3D WRKY domain 1 42 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g1688 100 Pfam WRKY DNA -binding domain 9 29 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g1688 100 SUPERFAMILY WRKY DNA-binding domain 3 29 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g1688 100 SMART WRKY_cls 8 43 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g1688 100 ProSiteProfiles WRKY domain profile. 3 29 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1688 Vra-Chr7 35459754 35461798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1688 1 29 WRKY Transcription Factor Family AT5G13080 72.414 1.10e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra7g1688 WRKY 1.6e-05 CL0274