Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1679 ATGTCTCGTGCCTGCCCTGCTACAGACTCCGTTGCTTCCGGCGAAATCATGCTGTTTGGGGTTAGAGTAGTAGTCGATTCCATGAGGAAGAGCGTCAGCATGAACAACCTCTCACAGTACGAGCATCCGCACGATGCTAACAACCACAAAGATAACAAAGATGTTCTCGCAGTTGGTTATGCATCAGCCGAAGACGCCGTTCCTCATAACACCGGCCGCCACCGCGAGCGGGAGCGGAAGCGAGGCGTTCCGTGGACGGAGGAAGAGCACAAACTGTTTTTGGTTGGGTTGCAGAAGGTAGGGAAAGGTGATTGGAGAGGAATATCCAAAAACTACGTGAAAACGCGAACTCCGACTCAGGTTGCGAGCCATGCTCAGAAATACTTTCTCCGAAGAAGCAACCTGAATCGTCGTCGCCGTAGATCCAGCCTATTTGACATCACCACCGACACGGTCTCTGCAATTCCGATGGAGGAAGAACAGGTCCAGAATCAAGACACCCTGTTTCATTCACAACCAGTGTGCACAGCAGTTTCCGAAACTAGCAAAAGTGGAATTCCAATGATGCCAGTTTATCAGTTTGGGATTGGTTCTGGGACTATTGTAGTCCAAGGTGGGAAACCATTAGAAGAACTGACTCTGGGGCAAGGAAACACAGAGCACAATGTGCCAATCAATCTGGTCCGTGCAATTCCTGTTATTGCAGATCCTAAAGCATCCACAGTGTCTGATATCATCACCCCAAGTTCTAGTTCTGCTGTTGACCCACCCACACTGTCCTTGGGGCTAACCTTCTCTTCTGACCAAAGGCAAACATCATCAAGACATTCTGCTTTACATGCCATGCCATGTTTCAGCAATGGAGATAGCATCATTAGTGTTGCTTAA 888 0.4887 MSRACPATDSVASGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPHDANNHKDNKDVLAVGYASAEDAVPHNTGRHRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQVQNQDTLFHSQPVCTAVSETSKSGIPMMPVYQFGIGSGTIVVQGGKPLEELTLGQGNTEHNVPINLVRAIPVIADPKASTVSDIITPSSSSAVDPPTLSLGLTFSSDQRQTSSRHSALHAMPCFSNGDSIISVA* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1679 295 CDD SANT 84 129 IPR001005 -
Vra7g1679 295 ProSiteProfiles Myb-like domain profile. 77 129 IPR001005 -
Vra7g1679 295 MobiDBLite consensus disorder prediction 63 83 - -
Vra7g1679 295 Gene3D - 83 135 - -
Vra7g1679 295 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Vra7g1679 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 131 IPR006447 GO:0003677
Vra7g1679 295 MobiDBLite consensus disorder prediction 68 83 - -
Vra7g1679 295 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 13 295 - -
Vra7g1679 295 PANTHER KIN2 13 295 - -
Vra7g1679 295 SMART sant 81 131 IPR001005 -
Vra7g1679 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 133 IPR017930 -
Vra7g1679 295 ProSiteProfiles SANT domain profile. 80 133 IPR017884 -
Vra7g1679 295 SUPERFAMILY Homeodomain-like 79 134 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1679 Vra-Chr7 35343362 35345360 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vra7g1679 Myb_DNA-binding 3.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1679 - - gmx:778059 420.624