Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1663 ATGTCGCTCAAGCGCCGCCCAGATGATGGCAAGACTCCAGACGACAAGCGGCGGAAGCCGCCTCCTTTCTCCAGTGTGGTGCGTGACGTGATGAGATTACAATCACTCGGGCACTTGCTGGAGCCAATTCTTGAGCCATTGGTTCGTAAAGTGGTTAAGGAAGAAGTTGAAGCAGCCCTAAAGAGACATTTAACCTGCATGAAACAGACCTGTGGAAAGGAATTGCATACTACTGAATTAAGAAATTTGCAGCTGCAGTTTGAAAACAGCATTTCTCTGCCTGTCTTTACTGGAGGACCTGAATCGATGGCTAAGGTAGAAATTGTAGTTCTTGAGGGTGATTTTGAAGAAGAAAGTGATATTTGGATGCCCGAAGAGTTCAAAAGCAATATTGTGAGAGAGAGGGAAGGGAAAAAGCCCCTTCTTACAGGAGATGTAATTTTATATCTTAAAGATGGTGTTGGTATGGTGGGTGAAATTTCGTATACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAATCATTTATTGTCAGAGATCACAGGGGAGAATTGTATAAGAAGCACCATCCTCCTAGTATGTCTGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAACGTTTGAGTCGGGAAAAAATCCTTACTGTTAGAGAGTTTCTCACGCTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTGGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGATACAACTAGGCACGTGTACTTCCCTCCTAATTCTCAACAACATGGTGTGGTCTTCAATGCTGTGGGACAAGTGACTGGACTGCTTTCTGAATGCGAGTATGTCACAGTAGATAAGCTGTCTGAAACTGAAAAGGTTGAGGCTCAAAACACAGTTTCTAATGCATTGAGACAAGGGGAGAAATATACTACTTTTGAAGATGAAGATTCTCTCATGGATGGGTCTTCACACTTATCTAATGTACTTCACTCCCCAAGCTCTCCCAAGACCGAGGGATCAAGTGCCAACAAGCTTTTGGGTCCCCAAAAGACTGGAGGATTCAATTACCCCCAAACAAATGCCTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTAGCTTGGATGACTATTGCTTGCCTAGTTTCGACAACATGGGCCTCAGTTTTCCAGTCCAAGTCTCGAACTCATTGATCTGTGACACTGATTCAATGGCTCATGCCTTTAGTGAGGAAGATCATCTGCAATTTTTTGATACCGATCTTCAGTCTCACGTTGAGGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCTCGCACGTTCTACGGCCAATGGTGGTGCGCAGAGGAGATGGAGAAAGGTATGCAACGTCCTAAAGTGGTTCATGGTTAGGAAACGAGGAAACCAAATACAGGTAAGGTTGTGA 1545 0.4447 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMRLQSLGHLLEPILEPLVRKVVKEEVEAALKRHLTCMKQTCGKELHTTELRNLQLQFENSISLPVFTGGPESMAKVEIVVLEGDFEEESDIWMPEEFKSNIVREREGKKPLLTGDVILYLKDGVGMVGEISYTDNSSWTRSRRFRLGARVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPSMSDEVWRLEKIGKDGAFHKRLSREKILTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVEHARTCVLDTTRHVYFPPNSQQHGVVFNAVGQVTGLLSECEYVTVDKLSETEKVEAQNTVSNALRQGEKYTTFEDEDSLMDGSSHLSNVLHSPSSPKTEGSSANKLLGPQKTGGFNYPQTNASSPDIMSSIYSVGGTSSLDDYCLPSFDNMGLSFPVQVSNSLICDTDSMAHAFSEEDHLQFFDTDLQSHVEADLQSAVDSFMLARSTANGGAQRRWRKVCNVLKWFMVRKRGNQIQVRL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1663 514 MobiDBLite consensus disorder prediction 1 24 - -
Vra7g1663 514 MobiDBLite consensus disorder prediction 356 385 - -
Vra7g1663 514 PANTHER OS02G0177800 PROTEIN 8 98 IPR012416 GO:0005516
Vra7g1663 514 PANTHER OS02G0177800 PROTEIN 99 507 IPR012416 GO:0005516
Vra7g1663 514 PANTHER CALMODULIN-BINDING PROTEIN 60 A 99 507 - -
Vra7g1663 514 PANTHER CALMODULIN-BINDING PROTEIN 60 A 8 98 - -
Vra7g1663 514 Pfam Calmodulin binding protein central domain 215 280 IPR046830 -
Vra7g1663 514 Pfam Calmodulin binding protein C-terminal domain 287 345 IPR046829 -
Vra7g1663 514 MobiDBLite consensus disorder prediction 1 23 - -
Vra7g1663 514 Pfam Calmodulin binding protein-like N-terminal domain 92 202 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1663 Vra-Chr7 35133664 35138733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1663 1 327 Calmodulin-binding Proteins AT5G62570 57.778 1.51e-140 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1663 - - gmx:100793156 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1663 7 35133664 35138733 Vra7g1663 7 35133664 35138733 ECH