Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1657 ATGGGTTTTGGAGGAAGATTGTTGCAATGGACTCCATTTGCAGCCATGATCATGGTGGAGTGCCTTGACGTGGGTCTCTCTACTTTAGGTAAAGCAGCCATGGAAAGAGGAATGAACCATTTCGTCTTTGTTGTCTACTCCAACGCCCTTGCAACTCTCATTCTCTTCCCTCTCTCTTTCCTCATCAACAGAACCACAAGAGCACCACTTTCGTTCGCTCTTCTCTGCAAGTTCTTCCTCCTAGGCACTCTTGGCATAACTGTTATGCAGAATTGTGTTTTCACCGCCATTGACTACAGCTCTCCAACTCTTGGATCCGCCATGAACAATTTGACTCCAGCTATCACTTTTGTGCTAGCTGTCATCTTTGGGATGGAGAAGTTGGATATTGGAAGCTCAATAAGCCAGATCAAGGTCACGGGCACAGTCCTATCCATCTCTGGAGCATTACTGGTGACCCTTTACAAGGGCATTCCCATCACCAGCTTTCGAATTCAACTCTCTCCATCGCAACCTTTGTCATCTTTGTTGGCTCAAACAAGTAACTGGGCTATTGGGGGTGCCTTCTTTGCCACTGCTTCTGTCTCTCTTGCACTCTGGAATATTACACAGGCAGCAATTCTTAAAGGATATTCATCACAGTCAACCATATTAGCCTTCTATTGCCTGTTTGGAACTATTCAAAGTGCAATACTGTCTATCATTGTAGTCAGGGATTCAAATGACTGGAAAATAAGCCCCGACATTGAGCTCATCTCTATATTATATTCGGCTATTATCGGAAGTGTGGTGTCTTTTTCAGTAATGACTTGGTGCATAAAAAGGAAAGGACCTGTTTTTGTTAGTTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGAGTGTTATCTTCCTTGGTGAAACGCTTCATATTGGCAGTGTCCTAGGCGCTGTGATAATCGCCATCGGATTTTACACAGTATTGTGGGCACAATCCAAAGAGGAAAACGCAAAAGGCCTCCAAGTTGATGGACAATCATTGCCATCTTCTGAAGCAAGTCCTTTACTGGAGACAATCACGTAA 1068 0.4438 MGFGGRLLQWTPFAAMIMVECLDVGLSTLGKAAMERGMNHFVFVVYSNALATLILFPLSFLINRTTRAPLSFALLCKFFLLGTLGITVMQNCVFTAIDYSSPTLGSAMNNLTPAITFVLAVIFGMEKLDIGSSISQIKVTGTVLSISGALLVTLYKGIPITSFRIQLSPSQPLSSLLAQTSNWAIGGAFFATASVSLALWNITQAAILKGYSSQSTILAFYCLFGTIQSAILSIIVVRDSNDWKISPDIELISILYSAIIGSVVSFSVMTWCIKRKGPVFVSLFKPVGIAIAAFSSVIFLGETLHIGSVLGAVIIAIGFYTVLWAQSKEENAKGLQVDGQSLPSSEASPLLETIT* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1657 355 Pfam EamA-like transporter family 187 323 IPR000620 GO:0016020|GO:0016021
Vra7g1657 355 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020|GO:0016021
Vra7g1657 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Vra7g1657 355 PANTHER WAT1-RELATED PROTEIN 8 349 IPR030184 GO:0016021|GO:0022857
Vra7g1657 355 PANTHER WAT1-RELATED PROTEIN 8 349 - -
Vra7g1657 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1657 Vra-Chr7 35069251 35071675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1657 12 353 Nodulin-like Gene Family AT5G40240 43.516 2.12e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1657 - - ccaj:109809148 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1657 7 35069251 35071675 Vra7g1657 7 35069251 35071675 ECH