Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1654 ATGCGCAACATTCAGATTGAAACGAAGCAAAACGGTGATGTGAAGTACTCGTATGAGTCATATCCTATATCTCCTTTCTCAGCTTATCAAGCTCCAAATGATGGTAACACTACCAACGAGCAAGAATCAACAACGCCGTCATCTCTCAGCAGAATCAGCCCACTCATTTTGCTGGTCATAATTGTTCTAGCAGTTATCTTCTTCGTGTATGGACTTGTCCATTTGGTTCTATGGTTTTTCATGAAAACACCAACCTCTTCATCAATCTACAACTCCAACAGGTTCCACGAATCCACGCGATCACGTGTTCTTCAGAGGCAGCTTCAACAACTCTTCCGCTTGCACGATTCAGGTATAGACCAAGCCCTCATAGACGCTCTACCAGTTTTCCATTACCAAGACCTGCTGGGTTCAAAGGAACCGTTTGATTGTGCCGTGTGTTTATGCGAGTTCTCCGAGGATGACAAGCTGAGGTTGCTTCCTATGTGCACACACGCCTTTCACATGACCTGTCTTGACACGTGGCTTCTCTCGAATTCGACGTGTCCTCTTTGTAGGGCGTCTCTCTCGAACTACGTGGAGAATGAAAATGAAAATCCTATTTTGTTTAATGTGGGTATTGGGCCAAGTGGGTTGAGAGGTGAGGAAGAGAAGGGGTTTTCAGAGAGTGAAAGATCAGTTGGGAAAAGGGTGTTTTCTGTGAGACTTGGAAAATTCAGAAAGAATGGGATGGAGTTAGGGAGTGGAGATAGTTGTAGCTTGAATGAGAGAAGATGCTACTCCATGGGTTCATATAGGTATGTGGTTCGTGATTCCAATCTGCAAGTGGTTTTATCTGAATCTGGTGATGTTTCAGAAAATGAGAATGTGAAGGGAAAGAGGATAAGCGACTCAACCAAAGCTGAGAGCTTCTCTGTTTCCAAGATATGGCTTTGGTCCAAGAACCCTACATTTCATGCTTCTAATGCACCTTTCCCTTAA 981 0.4404 MRNIQIETKQNGDVKYSYESYPISPFSAYQAPNDGNTTNEQESTTPSSLSRISPLILLVIIVLAVIFFVYGLVHLVLWFFMKTPTSSSIYNSNRFHESTRSRVLQRQLQQLFRLHDSGIDQALIDALPVFHYQDLLGSKEPFDCAVCLCEFSEDDKLRLLPMCTHAFHMTCLDTWLLSNSTCPLCRASLSNYVENENENPILFNVGIGPSGLRGEEEKGFSESERSVGKRVFSVRLGKFRKNGMELGSGDSCSLNERRCYSMGSYRYVVRDSNLQVVLSESGDVSENENVKGKRISDSTKAESFSVSKIWLWSKNPTFHASNAPFP* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1654 326 SUPERFAMILY RING/U-box 123 195 - -
Vra7g1654 326 SMART ring_2 144 185 IPR001841 -
Vra7g1654 326 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 10 326 - -
Vra7g1654 326 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Vra7g1654 326 CDD mRING-H2-C3H2C2D_ZSWM2 144 186 - -
Vra7g1654 326 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 326 - -
Vra7g1654 326 Pfam Ring finger domain 143 186 IPR001841 -
Vra7g1654 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 195 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1654 Vra-Chr7 35047421 35049062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1654 50 323 C3H Transcription Factor Family AT2G18650 40.950 6.75e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1654 - - gmx:100807741 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1654 7 35047421 35049062 Vra7g1654 7 35047421 35049062 ECH