Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1648 ATGACTATGGCTGCTCGCAGACTTTCCTGGTTACTCTCTCGGTCTCTCTCTTCTTCTTCCCATTCTTCTGGAGCTGCTTTGTTTCACTCATTAGGAAGAAACTCCGGAGGGTGGAGAAACATCAATAGATTTAGCACGTCTGCAGCTGTTGAGGACCTAATCACTCCACAAGTTCCAATACGTTATACACAGCACCTGATAAATGGACGATTTGTGGATGCTGCATCAGGGAAAACATTTCCAGCTTATGACCCGCGAACGGGAGAAGTGATTGCTAATGTAGCTGAAGGGGATGCTGAAGACATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGGCCTTGGCCTAAAATGAGTGCATATGAAAGAAGTCGAATATTGCTTCGCTTTGCTGATTTGGTTGAGAAACACAACGATGAGCTAGCTGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGGCTGCCAAGTCAGAAGTTCCATTATTTGTGCGTTTATTTCACTATTATGCTGGTTGGGCGGATAAAATTCACGGGTTGACCGTCCCAGCTGATGGAGATTACCATGTTCAGACATTGCATGAACCAGTTGGTGTAGCAGGACAAATTATACCTTGGAACTTTCCTTTAATTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTGAAGTCTGCTGAGCAAACACCACTAACAGCTCTCTTTGTTGCAAAACTATTTCATGAGGCTGGTCTTCCGGAAGGTGTTCTGAATGTAGTTTCTGGGTATGGTCCAACTGCTGGTGCAGCTCTTGCAAGTCATATGGACGTGGACAAGCTAGCGTTTACTGGCTCGACAGATACTGGAAAAGTTGTACTTGAATTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTGTTCGACGATGCTGATGTTGACAAGGCTGTTGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGTTGTTGTGCTGGGTCTCGTACTTTTGTACATGAGCGTGTCTATGATGAGTTCTTGGAGAAATCAAAGAAACGAGCTTTGAGACGTGTTGTTGGAGATCCATTCAAGAAAGGTGTTGAACAAGGTCCTCAGATTGATGGAGAACAATTTGAGAAAGTCCTTAGGTACATAAAGTCTGGGATTGAAAGCAATGCTACCCTTGAATGTGGGGGGGATAGATTGGGCTCGAAAGGATTCTTTATCCAGCCAACTGTCTTCTCAAATGTGCAGGATGACATGTTGATAGCACAAGACGAAATCTTTGGCCCAGTTCAGTCCATCTTGAAATTCAAGGACACTGATGAAGTAATTGAACGGGCAAATAGAACACGTTATGGTCTAGCGGCAGGCGTGTTTACTAAGAACGTGGACACGGCCAACAAATTGATGCGGGCTCTGAGAGCCGGAACTGTGTGGATCAATTGCTTTGATGTTTTTGATGCTGCGATTCCTTTTGGTGGGTACAAGATGAGTGGTATTGGCAGGGAGAAAGGAATCTATAGTCTTCACAACTACCTCCAGGTGAAAGCTGTTGTCACACCATTGAAGAATCCTGCTTGGATATAG 1632 0.4479 MTMAARRLSWLLSRSLSSSSHSSGAALFHSLGRNSGGWRNINRFSTSAAVEDLITPQVPIRYTQHLINGRFVDAASGKTFPAYDPRTGEVIANVAEGDAEDINRAVSAARKAFDEGPWPKMSAYERSRILLRFADLVEKHNDELAALETWNNGKPYEQAAKSEVPLFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPVGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKSAEQTPLTALFVAKLFHEAGLPEGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVFDDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDGEQFEKVLRYIKSGIESNATLECGGDRLGSKGFFIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDTDEVIERANRTRYGLAAGVFTKNVDTANKLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVTPLKNPAWI* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1648 543 SUPERFAMILY ALDH-like 57 537 IPR016161 GO:0016491
Vra7g1648 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 313 502 IPR016163 GO:0016620
Vra7g1648 543 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 337 348 IPR016160 GO:0016491
Vra7g1648 543 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 30 543 - -
Vra7g1648 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 531 IPR016162 GO:0016491
Vra7g1648 543 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 30 543 - -
Vra7g1648 543 CDD ALDH_F2BC 60 535 - -
Vra7g1648 543 Pfam Aldehyde dehydrogenase family 71 533 IPR015590 GO:0016491
Vra7g1648 543 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1648 Vra-Chr7 34995580 34999648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1648 3 543 Aldehyde Dehydrogenase Gene Family AT3G48000 80.443 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1648 K00128 - zju:107405734 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1648 7 34995580 34999648 Vra7g1648 7 34995580 34999648 ECH