Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1617 ATGGCTCCCAAAACCGTATCCATTGACTACCAAACCACCCGGGTCTTACCCGAACCCGATATCTTCATACACTGTTCCCAAGGAACACGCATTCCAGCTCACGCTGCTGTTCTGGCTTCCGTGTCGCCGGTTTTGGAGAACTTCATAGATCGGCCACGTAAGCATCGGAGTTCCGAGAAAATAATCCAAATCCACGGCGTCCCTTGCGACGCCGTCATCGCCTTCGTTGGATTCCTTTACTCCTCCAGGTGCACTGAGGAGGTGATGGACAAGTACGGGATGCACCTGCTCGCATTGTCGCACGTGTACCTGGTGCCGCAGCTGAAACAGAGATGCATCAAGGGTTTGACCCAGCGCTTGACCACAGAGAACGTGGTGGACGTGCTGCAACTCGCGCGCCTCTGCGACGCACCGGATCTCCACCTCCGATGCATGAAGCTCCTCACCTATAACTTCAAAGCGGTGGAAGCAACCGAGGGGTGGAAGTTCCTCGTCAAACACGATCCCTGGCTCGAACTCGACATTCTCCGCTTCATCGACGAACACGAAACGAGGAAGAAGAAATCGAGAAGGTATAGGATGGAGCAGGGTCTGTACGGGGAACTGAGCGAGGCGATGGAGTGTCTGGAGCACATATGCTCGGAGGGGTGCACCCATGTTGGACCCTACGATGCGGAGGTGAAGAGAGAGAAGAGGCCCTGTGGCAGATTCTCCACGTGTGAAGGGCTTCAGGTTCTGATCCGCCACTTTGCCACGTGCGAGAAGAGAATGGGCGGTGGTTGCGTCCGCTGCAAACGGATGTGGCAACTATTTCGACTTCATTCATACGTTTGCCACCAAACTGATTCTTCCTGCAAGGTTCCTTTCTGCAGGCAATTTCAGTTGAAGATGCAGGAAGAGAAAAGAAAGGATGATGCTAAGTGGAAACTTCTAGCGAGGAAGGTTGCCTCAGCCAAAGTGATGTCTTCCCTGTCTCTTCCAAAGAGGAAACGAGATGAGGAGATCAGAGGCACAATAAACAATCACGGGATTAGAAGCTTTAAATTACTATGA 1053 0.5261 MAPKTVSIDYQTTRVLPEPDIFIHCSQGTRIPAHAAVLASVSPVLENFIDRPRKHRSSEKIIQIHGVPCDAVIAFVGFLYSSRCTEEVMDKYGMHLLALSHVYLVPQLKQRCIKGLTQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTYNFKAVEATEGWKFLVKHDPWLELDILRFIDEHETRKKKSRRYRMEQGLYGELSEAMECLEHICSEGCTHVGPYDAEVKREKRPCGRFSTCEGLQVLIRHFATCEKRMGGGCVRCKRMWQLFRLHSYVCHQTDSSCKVPFCRQFQLKMQEEKRKDDAKWKLLARKVASAKVMSSLSLPKRKRDEEIRGTINNHGIRSFKLL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1617 350 Gene3D TAZ domain 195 319 IPR035898 -
Vra7g1617 350 SUPERFAMILY TAZ domain 195 298 IPR035898 -
Vra7g1617 350 Pfam BTB/POZ domain 19 119 IPR000210 GO:0005515
Vra7g1617 350 ProSiteProfiles BTB domain profile. 19 83 IPR000210 GO:0005515
Vra7g1617 350 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 1 348 - -
Vra7g1617 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 348 IPR044513 -
Vra7g1617 350 SMART TAZ_2 196 291 IPR000197 -
Vra7g1617 350 Gene3D Potassium Channel Kv1.1; Chain A 17 120 IPR011333 -
Vra7g1617 350 Gene3D - 121 194 - -
Vra7g1617 350 SMART BTB_4 19 120 IPR000210 GO:0005515
Vra7g1617 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Vra7g1617 350 SUPERFAMILY POZ domain 20 119 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1617 Vra-Chr7 34618899 34621959 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vra7g1617 BTB 1.7e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1617 - - gmx:100807120 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1617 7 34618899 34621959 Vra7g1617 7 34618899 34621959 ECH
Vra7g1617 7 34618899 34621959 Vra5g0702 5 11371188 11374750 PCT