Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1608 ATGATCTCATTGGTAGTGTTTGGGTTCCTCACGCTCCTTTTCACCTTCTCATTGCTCACAGAGTTGAGAAAGCCCTCTGCAGAAAAGAGAAGGCTACCTCCGGGGCCAAAGAAACTACCCTTCATTGGCAACCTCCACCAGCTTGGAACGTTGCCCCATCGATCCCTTCAACACCTTTCACGTAAGCATGGACCTCTCATGTTCTTACAGCTAGGTTCCATACCAACCTTGGTAGTCTCTTCTGCTGACATGGTGAAAGAGATCTTCAAAAACTATGACTCAGTTTTCTCTGGGAGGCCTCTATTACACGCCGCAAACCGCTTAGGATACGGTTCAGCCGTGAGTTTTGCACCGTACGGTGAGTACTGGAGGGAAATGAGGAAAATCATGATCTCAGAGTTACTGAGTCCGAAGAGGGTTCGATCGTTTGAAGCTGTGAGATTTGACGAGGTGAAACGTATGCTTCAGGCTGTTTCTCTGTCCTCTGGTCCTGTCGACCTGAGTGAACTTACTCTCTCGGTGACCAACAATGTTGTTTGTCGGGTTGCTCTTGGCAAAAGGGAAAAGGGTACGGGTGATTCAAATAAGGTTTACAGAATGCTTAAAGAAACGCAGGAAATGTTGGGAGGGTTCTTCGTGGATGACTTCTTTCCACATTTGGGGTGGCTGAACAAATTCAGTGTCCTTGAAAGCAGGCTAGAGAAGAATTTCAGAGACATGGACCGGTTTTACGACGAAGTGATCAAGGAGCACGTTGATAAGTCTCGTGAGACGGCAGGAGCAGAGCATGAAGATGTGGTGGATATGCTGCTTCAAGTTCAGAAGGATCCCAATCAACCCATTGCCATCAGTGACCAACAAATTAAGGGAGTATTAGTGGACATATTTGTAGCAGGAACTGATACTGGTGCAGCAACAATGATATGGATAATGACCGAGTTGATTAGGAATCCGAAAGCGATGAAAAAGGCACAAGAAGAAGTAAGAGAAATTGTGAAGGGAAAGGACATGGTAGAAGAGATTGACCTCCAAAAGCTCTTGTACCTCAAGTTAGTTGTGAAGGAGGCACTGAGACTCCATCCACCTGTGCCATTGCTTGTGCCGAGAGAGACAACAGAGGCCTGCATGATCAAAGGGTTTCAAATCCCTGCCAAAACGAGGGTGCTTGTCAATGCAAAATCAATAGCAACGGATCCAACTTGTTGGGAGAATCCAAATGAGTTCTTACCAGAGAGGTTCTTGAACAGCTCAGTAGATTATAAAGGGCAACACTTTGAGATGTTGCCATTTGGGGTAGGCCGAAGGAGTTGCCCTGGAGTGAACTTTGCCATGCCTCTTGTTGAGTTAGTACTTGCAAATCTTCTGCTTCGTTTTGACTGGGAACTGCCTGTTGGACTTGGAATACAGGACTTGAATATGGAAGAAGCAATTGGCATAACCATGCACAAGAGAGATCATCTTTGGCTCAGAGCCACCCCCTTTCACGAGTAG 1491 0.4634 MISLVVFGFLTLLFTFSLLTELRKPSAEKRRLPPGPKKLPFIGNLHQLGTLPHRSLQHLSRKHGPLMFLQLGSIPTLVVSSADMVKEIFKNYDSVFSGRPLLHAANRLGYGSAVSFAPYGEYWREMRKIMISELLSPKRVRSFEAVRFDEVKRMLQAVSLSSGPVDLSELTLSVTNNVVCRVALGKREKGTGDSNKVYRMLKETQEMLGGFFVDDFFPHLGWLNKFSVLESRLEKNFRDMDRFYDEVIKEHVDKSRETAGAEHEDVVDMLLQVQKDPNQPIAISDQQIKGVLVDIFVAGTDTGAATMIWIMTELIRNPKAMKKAQEEVREIVKGKDMVEEIDLQKLLYLKLVVKEALRLHPPVPLLVPRETTEACMIKGFQIPAKTRVLVNAKSIATDPTCWENPNEFLPERFLNSSVDYKGQHFEMLPFGVGRRSCPGVNFAMPLVELVLANLLLRFDWELPVGLGIQDLNMEEAIGITMHKRDHLWLRATPFHE* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1608 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vra7g1608 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PANTHER OS08G0105600 PROTEIN 1 495 - -
Vra7g1608 496 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PANTHER CYTOCHROME P450 71A9 1 495 - -
Vra7g1608 496 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1608 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1608 Vra-Chr7 34522896 34526000 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1608 22 492 Cytochrome P450 AT4G31500 45.000 1.45e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1608 K20617 - gmx:100806157 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1608 7 34522896 34526000 Vra7g1608 7 34522896 34526000 ECH
Vra5g0719 5 11688368 11690308 Vra7g1608 7 34522896 34526000 PCT