Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1605 ATGGCTCTTAAACAGAGGACTTTTGAGCAAATGGAAGAAGCATTCTCTTCTACCTTCTATCTTGCTCTTTCCTTCTTCATCGGTGTTCTGTTATTCTTTAAGCTCGCAAGAAGATCCAAACCCAAAACCAATCTGAATCTGCCACCATCTCCCCCAAAGCTCCCATTCATAGGCAATCTGCATCAGTTTGGGACACTGCCACATCGAGCTCTTCGAGATCTCTCTCTAAAATATGGAGATATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTCGTCGTTTCATCTGTAGATTTGGTCACCGAAATAACCAAAGCACATGACCTAGCCTTTTCGGACCGACCCCAAAACACTTCCTCTAAAATCTTACTCTATGGATGCACAGATGTTGGCTTCTCACTCTATGGAGAAAACTGGAGACTGAAAAGAAAAATATGTGTTCTTGAACTTTTGACCACCAAAAGGGTGCAATCATTTCGAGTCATCAGAGAAGAAGAAGCTGGGGAGTTGGTGAAAAAGTTACGTGAAGCAAGCACGAACGATGTCAGTTACGTGAATCTGAGTGAGATGATTATGTCAACAACAAATAGTATCGTGTGTAAATGTGCTCTTGGAAGGAAGTTTGCAGGAGATGGTTACAGCAGAGTGAAAGTGTTGGCAAGGGAAGCCATGATTCATATTGCAGCTTTCACTGTTAGAGATTACTTCCCTTGGCTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACAGCTGCAGCAATGGATGCTTTATTTGAGGAAGCAATTGCAGAACGTTTGAGGACGAGAAGAGAAGGTGAGCACTCCAAAATGAAAGATTTCTTGGATATTCTCCTCAACCATCACGAGGATAACACGCTGGGATACGAGTTCACCAAAAATGACATCAAATCACTGATAACGGACATGTTTCTGGGAGGTACCGACACAACTGCAGCCACATTAGAATGGGCCATGTCAGAACTTATGAGGAACCCAAGCACAATGAATAAAGTGCAAGAAGAAGTGAGGAGAGTAGTAGGTGATAAATCAAAGGTGGAAGAGAATGATGTGAATGAAATGCGATTTCTAAAATGTGTAGTTAAAGAAACTATAAGGTTGCACCCTCCAACTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTTAAACTAAATGGATACGATATTCCTGCAAAAACAACGGTATATATCAATGCATGGGCAATGCAAATGGATCCTAAACTTTGGGATCGTCCTCAAGAGTTTTTGCCAGAGAGATTTGAAAACAGTGATTTTGATTTCAAAAATCAAGAAAACTTTCACTTTATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATGAGTTTTGCAATTAGTTCAATTGAGTATGTGCTTGCTAATCTTCTTTATTGGTTCGACTGGAAGTTGCCTGAAACTGATACTGGCACACTTGATATAGACATGAGCGAGATATTTGGACTTGTTGTCTCAAAGAAACTACCACTTCTCCTCAAACCAAAAGCCTTTTCATCTTAA 1560 0.409 MALKQRTFEQMEEAFSSTFYLALSFFIGVLLFFKLARRSKPKTNLNLPPSPPKLPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQTPTLVVSSVDLVTEITKAHDLAFSDRPQNTSSKILLYGCTDVGFSLYGENWRLKRKICVLELLTTKRVQSFRVIREEEAGELVKKLREASTNDVSYVNLSEMIMSTTNSIVCKCALGRKFAGDGYSRVKVLAREAMIHIAAFTVRDYFPWLGWVDVVTGKIQKYKATAAAMDALFEEAIAERLRTRREGEHSKMKDFLDILLNHHEDNTLGYEFTKNDIKSLITDMFLGGTDTTAATLEWAMSELMRNPSTMNKVQEEVRRVVGDKSKVEENDVNEMRFLKCVVKETIRLHPPTPLLAPRVTMSDVKLNGYDIPAKTTVYINAWAMQMDPKLWDRPQEFLPERFENSDFDFKNQENFHFIPFGFGRRGCPGMSFAISSIEYVLANLLYWFDWKLPETDTGTLDIDMSEIFGLVVSKKLPLLLKPKAFSS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1605 519 Pfam Cytochrome P450 48 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vra7g1605 519 Gene3D Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 517 - -
Vra7g1605 519 PANTHER CYTOCHROME P450 71B11-RELATED 13 517 - -
Vra7g1605 519 SUPERFAMILY Cytochrome P450 48 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 Coils Coil 342 362 - -
Vra7g1605 519 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1605 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1605 Vra-Chr7 34471085 34473681 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1605 48 517 Cytochrome P450 AT3G26330 43.515 6.74e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1605 K20617 - gmx:100803922 793.882