Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1603 ATGGCTCTTCAACAATGGCGTTGTGAGCAAATGGAAAGAGTATTCTATTCTACCTTCTATCTTTCTCTTTCCATTTTCATCAGTGTTTTCTTATTCTTTAAGCTCGCAAGAAGATCCAAACCAAAAACCAATCTGAATCTGCCAACATCTCCACCAAAAATCCCATTCATAGGCAATCTGCATCAGTTTGGGACACTGCCGCATCGAGCTCTTCGAGATCTCTCTCTGAAATATGGAGATATAATGATGTTGCAGTTGGGACAGATGCAAACTCCAACCCTCGTCGTTTCATCTGTAGATTTGGTCACCGAAATAATCAAAACACATGACCTAGCCTTTTCGGACCGACCCCAAAACACTGCTGCAAATATCTTACTCTATGGATGCACAAACTTTGCTTTCGCACTCTATGGAGAAAACTGGAGACAGAAAAGAAAAATATGTGCGGTTGAACTTCTGAGCACGAAAAAGGTGCAATCATTTGGAGCAATCAGGGAAGAAGAAGTTGCGCAGTTGGTGAAGAAGGTACGTGAAGCTAGCTGGAGTGGTGAAAACGTTGTGAATCTAAGTGAGATGATTATGTCAACATCAAACAATATTGTGTGCAAATGTGCTCTTGGGAGGAAGTTTGCAGGAGATGGTTACAGGAGAGTGAAAGAGTTATCAAGGGATGTGATGATTCATCTCACAGCTTTCACAGTGAGAGATTACTTTCCTTGGTTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACTGCTGAAGCACTGGATAGTTTATTTGATGAGGTAATTGCAGAAGAAATGAGCGTGAAAACGGAAGGTGAACATTCCAAAAACAAAGTCTTCTTAGACGTCCTCCTCCAACTTCATGAGGATAACAAGCTCAGCATCGACCTCGCCAAAAATGACATCAAAGCAATTTTAACGGACATGTTTGTGGGAGGCACTGACACAACTTCATCGGCGATAGAATGGACTATGTCTGAGCTTTTAAGAAATCCAGTCATAATGAAAAAAGTACAAGAAGAAGTGAGAGCAGTCGTAGGTGATAAATCAAATGTAGAAGAAAGTGACATTAAGAAAATGCACTACTTAAAGTGCGTGATCAAAGAATCTCTAAGATTACACCCTCCAGCTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGCTGTAAAACTGAAAGGATATGATATTCCGGCAAAAACAACGGTATATATAAATTCATGGGCAATGCAAAGGGATCCCAAATTCTGGGAAAGTCCTGAAGAGTTCAAGCCAGAGAGATTTGAAAATATTGAAGTTGATTTTAAAGGTCAAGAAGACTTTCAGTTTATTCCGTTTGGTTTTGGGAGAAGAGGATGTCCTGGAATTAACTTTGCCAATGCTTCTATGGAGTATATGCTTGCTAATCTTCTTCATTGGTTTGATTGGAAGTTGCCAGAAACTGATACACAAGACATAGATATGACCGAAATATTTGGACTCGTTGTCTCAAAGAAAGTACCACTTCACGTTACACCAACAACCTTTTCATTCTAA 1554 0.4009 MALQQWRCEQMERVFYSTFYLSLSIFISVFLFFKLARRSKPKTNLNLPTSPPKIPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQTPTLVVSSVDLVTEIIKTHDLAFSDRPQNTAANILLYGCTNFAFALYGENWRQKRKICAVELLSTKKVQSFGAIREEEVAQLVKKVREASWSGENVVNLSEMIMSTSNNIVCKCALGRKFAGDGYRRVKELSRDVMIHLTAFTVRDYFPWLGWVDVVTGKIQKYKATAEALDSLFDEVIAEEMSVKTEGEHSKNKVFLDVLLQLHEDNKLSIDLAKNDIKAILTDMFVGGTDTTSSAIEWTMSELLRNPVIMKKVQEEVRAVVGDKSNVEESDIKKMHYLKCVIKESLRLHPPAPLLAPRVTMSAVKLKGYDIPAKTTVYINSWAMQRDPKFWESPEEFKPERFENIEVDFKGQEDFQFIPFGFGRRGCPGINFANASMEYMLANLLHWFDWKLPETDTQDIDMTEIFGLVVSKKVPLHVTPTTFSF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1603 517 PANTHER CYTOCHROME P450 71B11-RELATED 13 516 - -
Vra7g1603 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vra7g1603 517 SUPERFAMILY Cytochrome P450 50 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 516 - -
Vra7g1603 517 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 Gene3D Cytochrome P450 37 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1603 517 Pfam Cytochrome P450 48 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1603 Vra-Chr7 34457838 34460092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1603 25 515 Cytochrome P450 AT3G48280 41.582 3.24e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1603 K20617 - gmx:100803922 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1603 7 34457838 34460092 Vra7g1603 7 34457838 34460092 ECH