Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1602 ATGGCACATGAATCAACTCCAAGACCATGTTGTCAAAGTTCAACGCTCTCCCTATCCTTCCTTTGCATCTTCATCAGCATCGTCTTCGTCGTGTTTAAACTATCAAGAAGAACCAAAACAAGTTCACCTCCATCCCCACCTAAGATACCTTTCATCGGAAATCTTCATCAGCTTGGCCTGTTGCCGCACCGTTCCTTGCAAGCCCTCTCTCACAAGCATGGCCCTCTCATGTTGCTACAGCTGGGGCAGGTCCCCACGCTCATCGTTTCATCTGCTGACGTTGCCGGAGAAATATTCAAAACCCACGACCTCGTTTTCATGAACCGGCCAAAAACCACCGCCGCGGGAATCTTTCTCTACGGCTACAAGGACGTGGCTTTCACCCCCTACGGCGACGAGTGGAGACAGAAGAGGAAGGTGACCGTTCTTGAGCTTGTGAGCATGAAAAGCGTGCGGTCGGTGCAATTCATCCGCCTTGAAGAAGTCGCAGAAATGATGGGTGCCATACGCGAAGCGTGTGCGAATGAAACAGCCTCTGTGAACCTGAGTGAGTTGTTGATTGCACTCACCAACAACATAATGTCGAGATGTGTTCTTGGACAGAAGTACGATACTCCCGATGGTAGTAACAACTTTGGGGACGTTGGAAGGAAATTGTTGACTCAATTCACATCTTTCTGTGTAATAGCAGAACATAAAGAAAAGATGACGAAGAAGGATGGCATCAAATCCGAAAAGAAAGACTTCCTGTATATTCTTCTTCAACTTCAAGAGACCGGTTCGCTTGGTTTTGAGCTCTCCCAAGATACTCTCAAAGCAATGCTAATGGACATGTTTATAGGGGCAAGTGACACAACTTCAACAACTCTGGAATGGACTATGGCGGAGCTCATGAGGAATCCAAATAGCATGGAAAAGGTTCAGGTAGAAGTGAGAAGAGTGGTCGGTGATAAAGCAGAAGTTGATGAAGATGATGTGAAGCAAATGAGTTACTTGAATTGTGTAATTAAAGAAACCTTGAGGTTGCATCCACCAGCTCCTCTTTTGCTTCCTAGAGAGACAACCTCTGCTGTGAAACTTAGAGGGTACAATATTCCAGCCAAGACAAGAGTAATGTTGAACGCATGGGCCATACAGAGAGACCCTGAACTTTGGGAAAGACCAGATGAGTTTCTTCCTGATAGATTTGAAAAGAAGGACGTAGATTTCAAAGGACAAGATTTGTATATTCCGTTTGGTGGCGGAAGAAGGGGATGCCCAGGAATTACATTTGGGATGAGTGTAGCTGAGTATGCACTTGCTAATCTTCTTTATTGGTTCGATTGGAAAGTGCCTAAAACTGATGCAACTGTGCAAGATATTGACATGAACGAGAGATATGGTATCACTGTCAACAAGAAGGTTCCACTTCTCCTTCAACCAATACCCTTCTCCTTAGGAAGTGGACGTAAACCTTCACATATCCACCTTTAA 1473 0.4521 MAHESTPRPCCQSSTLSLSFLCIFISIVFVVFKLSRRTKTSSPPSPPKIPFIGNLHQLGLLPHRSLQALSHKHGPLMLLQLGQVPTLIVSSADVAGEIFKTHDLVFMNRPKTTAAGIFLYGYKDVAFTPYGDEWRQKRKVTVLELVSMKSVRSVQFIRLEEVAEMMGAIREACANETASVNLSELLIALTNNIMSRCVLGQKYDTPDGSNNFGDVGRKLLTQFTSFCVIAEHKEKMTKKDGIKSEKKDFLYILLQLQETGSLGFELSQDTLKAMLMDMFIGASDTTSTTLEWTMAELMRNPNSMEKVQVEVRRVVGDKAEVDEDDVKQMSYLNCVIKETLRLHPPAPLLLPRETTSAVKLRGYNIPAKTRVMLNAWAIQRDPELWERPDEFLPDRFEKKDVDFKGQDLYIPFGGGRRGCPGITFGMSVAEYALANLLYWFDWKVPKTDATVQDIDMNERYGITVNKKVPLLLQPIPFSLGSGRKPSHIHL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1602 490 SUPERFAMILY Cytochrome P450 43 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 Pfam Cytochrome P450 43 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 Pfam Cytochrome P450 228 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 Gene3D Cytochrome P450 28 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 228 - -
Vra7g1602 490 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 228 476 - -
Vra7g1602 490 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS P450 superfamily signature 281 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1602 490 PANTHER CYTOCHROME P450 71B11-RELATED 19 228 - -
Vra7g1602 490 PANTHER CYTOCHROME P450 71B11-RELATED 228 476 - -
Vra7g1602 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1602 Vra-Chr7 34451196 34453298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1602 18 477 Cytochrome P450 AT3G26300 42.394 1.46e-128 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1602 - K20617 vra:106753291 580.867