Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1595 ATGTCGTTGGAAGAAGTTACTTGTGAGGTCAACAACAATTCCATTCAGAATATCAATGATAATGTCCCTAAAATTCATATGTGGTTTGATACAATTGAAGAAGTCAAGAGTTTTTATACAAACTATGTTGTGAGATGCGGTTTTGGTGTTCGGATAAGGACTTCTAGGAGAAATAAGAATAACGAGTTAAACTTCATGAAATTAGTGTGCTCTAGGGAAGGGAAGTACCTATCTCCCATTGCTCGAGAATGGAAAGCCCAGCCAAGTCAAAAAACTCAATGTCCTGCTGGAATCACAGTTGTTATGAAAGAAGGAAGATGGCAGGTGAGAACAGTTATTAATGAACACAACCATGACACGTGTCCGAATAATTTCAACCTCATACATGGTAATCGAAGACTTAATATGCATGCGAAGCACACCCTTAATATGAATCATGATGCTGGTGTTCGCATTAACAAAAGTTTCATATCCTTGGTTAATGATGCCGATAGATTTGAAAAGATAGAATTCCTGGAACGTGACGCCCGTAATTACATTGGATAA 546 0.3773 MSLEEVTCEVNNNSIQNINDNVPKIHMWFDTIEEVKSFYTNYVVRCGFGVRIRTSRRNKNNELNFMKLVCSREGKYLSPIAREWKAQPSQKTQCPAGITVVMKEGRWQVRTVINEHNHDTCPNNFNLIHGNRRLNMHAKHTLNMNHDAGVRINKSFISLVNDADRFEKIEFLERDARNYIG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1595 181 Pfam FAR1 DNA-binding domain 37 120 IPR004330 -
Vra7g1595 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 120 - -
Vra7g1595 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 11 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1595 Vra-Chr7 34269411 34269956 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra7g1595 FAR1 1.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1595 - - vra:106763416 247.669