Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1586 ATGGCTTCCCGCAATCCCAGCAATAAAAGGGTGGGCCCCGAAGAAGCTTCTCTTGACAAGCGTCGCAGGGGCACCGGAGCTGAGAAAATGGAGCGACAGGGCGGTCCGGCTGCTGCTGGGAGGCCTAGAACGCCGTTTTCCGTTGTCACAAATCGCTCAGACCTTAACACGACGAGTGATGTCACCGATGCGGTTGATTTCACGAAGGAGGAGGTGGAGGCTTTGCTGAATGAAAAGAAGAAGGGAAATACCTATGATAGTAAGAAAAAGATGGAGCAGATGACGGATCTCATTAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGGATAGAAGAAGGGTATGTTCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGCAGTGATACTAAGACTGAGATGAAGAATAAGATTGATGAGTTGGAGGAGACTCTATCTGATTCGAGGAGGAAAATTTCTTGTCTAGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCGATTAATTCTTATGGTAAAGAAAAGGAAGTCAGAACTAAAGCTGAGAAAGTACGGGATGAGAAGTCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAATTGCCGAGAAGAAGGCCATTTTAAATGAAGATTTGTACAACCGATCACAGGAGTATAATATGAGCTTGCAGCAGTACAATAGTCGTCTTCAGTTTGATCTTGAAACAGTTAATGAGGCCCTTAAACGGAATGAAACTGAGAAAGCAGCCATTGTTGAGAGCCTTAGCAATTTAAGAGGACACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGACGAGACTATGAAGCAGAAAGAAATTTTAGCAAATGAGCTCAAATGTGTTCGTGAGGAGTTAAAGCAAGTTAGAGATGACCGTGACCGTCAGTTGGAGCAAGTACATGCCCTATCGGGAGAAATAGCGAGGCACAAAGAATATACAGGGAAAACATGTACACAATTGGATACGTTGATGATTAAAACAAATGCTCTTGAGGAAACTTGTTCATCTCAAAAGGATCAAATACACATACTGCAGCAGCAGTTGTTTGCGGAAAGAGAGAAGTTAAAGACTGCTGATCTATCAGCTTCTGAAACAAGAACAATGTTTGACGAGCAGAAGAGGATTATACAGGGGCTACAGGATCGTTTGGCAGATAAAGAATTTCAAGTAGTAGAAGGAGAGAAGTTAAGAAAAAAACTGCATAACACTATTTTGGAACTAAAAGGAAATATTCGTGTTTTTTGCCGTGTACGGCCACTCCTACCGGATGACAGTGCGGACACAGTTGTTTCATTCCCTACTTCAACAGAAGCGCTTGGTCGGGGGATTGAATTGGTGCAAAGCGGGCAGAAGTACAATTTCACATTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTTTGCATCTTTGCATACGGACAGACGGGCTCAGGTAAAACCTATACTATGATGGGTAGGCCTGATGAGCCAGATCTGAAAGGGTTGATACCCCGTTCTTTAGAACAGATATTTCAGACTAGCCAGTCTCTAAAAGACCAAGGGTGGAGGTACACAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTATTAACAAATCGGTCAAGTGATCACGCACGAACGGAAAATAGTGCCTCCAGCAAGCAGTACACTATCAAACATGATGCAAATGGAAACACACATGTTTCGGACCTCACAATAAAGGATGTTTGTAGCGCAGATGAGATTTCGTCCCTCCTACGACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAACAGTCATCCAGAAGCCATTTTGTCTTTACACTGCGTATAAGTGGGAAAAACGAGAACACTGAACAACAAGTCCAAGGTGTCTTAAACCTGATCGATCTTGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCAACTGGAGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTATCGAGTTTGAGCGATGTCATATTTGCCTTGGGAGGAAAGAAAGAAGATCATGTTCCTTTTAGGAATTCAAAGCTGACGTATCTTCTCCAGCCATGTCTCGGTGGTGACTCTAAAACGTTGATGTTTGTCAACGTCTCACCCGATCAATCTTCTACTGGTGAGTCGCTCTGTTCCCTCCGCTTTGCAGCCAGAGTTAATGCCTGCGAAATTGGGATTCCAAGGCGTCAGACTCAAACATCATTATCATCACGCTCCTCAGAATCCCGTTTGAGCTATGGTTAA 2379 0.4372 MASRNPSNKRVGPEEASLDKRRRGTGAEKMERQGGPAAAGRPRTPFSVVTNRSDLNTTSDVTDAVDFTKEEVEALLNEKKKGNTYDSKKKMEQMTDLIKRLKACVRWYKRIEEGYVQEKEKLQSELEASEKKCSDTKTEMKNKIDELEETLSDSRRKISCLEERIVKEESDKLEAINSYGKEKEVRTKAEKVRDEKSAELEKVRDEKSIAEKKAILNEDLYNRSQEYNMSLQQYNSRLQFDLETVNEALKRNETEKAAIVESLSNLRGHNKALQDQLVSLKVSQDETMKQKEILANELKCVREELKQVRDDRDRQLEQVHALSGEIARHKEYTGKTCTQLDTLMIKTNALEETCSSQKDQIHILQQQLFAEREKLKTADLSASETRTMFDEQKRIIQGLQDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSADTVVSFPTSTEALGRGIELVQSGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDEPDLKGLIPRSLEQIFQTSQSLKDQGWRYTMQASILEIYNETIRDLLLTNRSSDHARTENSASSKQYTIKHDANGNTHVSDLTIKDVCSADEISSLLRQAAQSRSVGRTQMNEQSSRSHFVFTLRISGKNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALGGKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDQSSTGESLCSLRFAARVNACEIGIPRRQTQTSLSSRSSESRLSYG* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1586 792 PANTHER KINESIN-LIKE PROTEIN 26 792 - -
Vra7g1586 792 MobiDBLite consensus disorder prediction 580 599 - -
Vra7g1586 792 Coils Coil 186 213 - -
Vra7g1586 792 Coils Coil 284 318 - -
Vra7g1586 792 SMART kinesin_4 428 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 MobiDBLite consensus disorder prediction 1 55 - -
Vra7g1586 792 PANTHER KINESIN-LIKE PROTEIN KLP-3 26 792 - -
Vra7g1586 792 ProSitePatterns Kinesin motor domain signature. 666 677 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra7g1586 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 765 IPR027417 -
Vra7g1586 792 CDD KISc_C_terminal 428 769 - -
Vra7g1586 792 Gene3D Kinesin motor domain 371 769 IPR036961 -
Vra7g1586 792 PRINTS Kinesin heavy chain signature 503 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 PRINTS Kinesin heavy chain signature 636 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 PRINTS Kinesin heavy chain signature 667 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 Pfam Kinesin motor domain 436 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 ProSiteProfiles Kinesin motor domain profile. 430 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1586 792 Coils Coil 112 171 - -
Vra7g1586 792 MobiDBLite consensus disorder prediction 13 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1586 Vra-Chr7 34172599 34178470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1586 396 764 Calmodulin-binding Proteins AT5G65930 40.921 2.80e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1586 K10405 - gmx:100818140 1221.84