Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1583 ATGTTGTGGTCATTGCAAACTTGCTTCGCCATAATCAGTGGTGCAGGTAGCATTGAATTCAATGGAGGATCGGAAGAAACTGATCATAAAACATTATTTGATAAATCCTTTTGGTACAGTTTTAGCATTGGTTATGTCTGTTCAGCCAGCGGGATCATCTTTGCTTTTATGTGCTTCTGTGTCCCTTGGGCGCAACTAAAGAAGAGCAAGAGAAAGTTCATGTCTTCCAACGTTGGTAGGCATGATATGCATGCAATAAAGGCAAACCAAGTTCCCAAACTACTACTCTATCTGTTGTTGCTCAAGAAAGGAAACCAAGAGATTTCTAGAGTACTGGACAAACTAAGATCGAGTATCAGCTTCATGGAACTGTGTAGAGCAACTGATTACTTCAACATGACCAATGTTATTGGGACAGGAAAGACAGGGACAGTGTACAAGGCCAAGCTTTCTAATGGCTCAAAAGTGGCAGTGAAGAGACTCTATGATTCAAAGCTATTTGAGACAAAGTTTGCCTTAGAAATCGGGATTCTACACAGATTCAAACATGGAAACTTAGTGGATCTTCTTGGGTTTTGCACAGAGAGAAAACAGAGGATCCTTGTGTATGAATTCATGCCAAATGGTAAACTCTCTGATTGGTTACATCCTTTGCAAAATGAAGCTTTTCCATTGGATTGGCCAATAAGGCTTAAAATAGCACTTGGGTTGGCTAGAGGTTTATCCTTTCTCCATGAGTGTTGCAACTGGAAGATACTCCATTTTGGTATAAGCTCGGAGCATGTTTTGCTTGATAAGAATTTTGAGCCCAAATTATGGAATTTCACAAGTGCTGAACTCATGAAAGAAAAGCAGAAGAAGCTAGGGAAGAAGGATGTGTACGATTTTGGCGTTGTTCTGATGGAGCTTATCACTGGAAAGAAGCACGTTGAAATGAGTATAGATTTTAATGTCATTGATTCATCTTTGTTGGGGAAAGGATTCGATGAGCAAATATCATGTCTGGTTAAGGTTGCAGTTGATTGCATTCAGTTGTCTCCACACCAGAGACCAAGTATGCTTGATGTGTATAAATATATAGAAAGGTTATGGGAAGGATACGAAACTGATGACTGGTTCATCCTCTCAATCCATCCTCTTTGTCCATCAGCGCGCAAGGGAACCTACAGATATGCAGCTCCTGAATATCTAGCCACAGGTCATCTTACTGCCAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTGCTAGAAATGTTATCTGGAAAGAGGGCAGTTGACAAGAATAGACCATCTGGACAACACAATTTGGTGGAATGGGCTAAACCATACCTAGCAAACAAACGTAAAATATTTCGTGTGTTGGACACACGGCTTGAAGGACAATATTCAACGGATGATGCCTATAAAGTGGCCAACCTTGCCTTGCGGTGCCTGTCAATAGATTCCAAGTTCAGGCCAAACATGGATGAAGTAGTCAGAACATTGGAAACAAAAAATCTCAAGCACGCTGATGAAGGTGGATTGAAGGTTGATGAACCNTAA 1542 0.4079 MLWSLQTCFAIISGAGSIEFNGGSEETDHKTLFDKSFWYSFSIGYVCSASGIIFAFMCFCVPWAQLKKSKRKFMSSNVGRHDMHAIKANQVPKLLLYLLLLKKGNQEISRVLDKLRSSISFMELCRATDYFNMTNVIGTGKTGTVYKAKLSNGSKVAVKRLYDSKLFETKFALEIGILHRFKHGNLVDLLGFCTERKQRILVYEFMPNGKLSDWLHPLQNEAFPLDWPIRLKIALGLARGLSFLHECCNWKILHFGISSEHVLLDKNFEPKLWNFTSAELMKEKQKKLGKKDVYDFGVVLMELITGKKHVEMSIDFNVIDSSLLGKGFDEQISCLVKVAVDCIQLSPHQRPSMLDVYKYIERLWEGYETDDWFILSIHPLCPSARKGTYRYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKRAVDKNRPSGQHNLVEWAKPYLANKRKIFRVLDTRLEGQYSTDDAYKVANLALRCLSIDSKFRPNMDEVVRTLETKNLKHADEGGLKVDEP* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1583 513 Gene3D Transferase(Phosphotransferase) domain 1 377 508 - -
Vra7g1583 513 Gene3D Transferase(Phosphotransferase) domain 1 290 372 - -
Vra7g1583 513 PANTHER OS01G0750732 PROTEIN 386 497 - -
Vra7g1583 513 PANTHER OS01G0750732 PROTEIN 39 365 - -
Vra7g1583 513 SUPERFAMILY Protein kinase-like (PK-like) 382 498 IPR011009 -
Vra7g1583 513 Pfam Protein kinase domain 384 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1583 513 Pfam Protein kinase domain 133 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1583 513 ProSitePatterns Protein kinases ATP-binding region signature. 137 159 IPR017441 GO:0005524
Vra7g1583 513 SUPERFAMILY Protein kinase-like (PK-like) 113 360 IPR011009 -
Vra7g1583 513 ProSiteProfiles Protein kinase domain profile. 131 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1583 513 Gene3D Transferase(Phosphotransferase) domain 1 206 289 - -
Vra7g1583 513 Gene3D Phosphorylase Kinase; domain 1 99 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1583 Vra-Chr7 34140944 34153324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1583 383 500 Receptor kinase-like Gene Family AT4G33430 38.333 9.71e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vra7g1583 Pkinase 7.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1583 - - vra:106766350 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1583 7 34140944 34153324 Vra10g1424 10 19342215 19344583 PCT