Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1582 ATGGAAGAAAATTCAATTCCATTCTTCCTTTTCTTAACTTATATGAGAAAGGATCGTTTGTGCATGAGCACAGAAATGGGTTCTCAAAGAAAGAGGGATATTTTCATCCATGTTTTCTTGTATTCTTTGCTGAGATCTCTAATGGTAGGTAATGCTGTCGAAAGCGATATCTTCTGCTTAAAATCCATTAAGGATTCCTTGGAAGATCCTTTTAATCACTTATCAAGCTGGAACTTCGACAACAGAACTGAAGGTTTCATATGCCATTTTGTGGGCGTTTTATGCTGGCATCCGGATGAGAATAAAGTGTGGAGTATCTCGCTGCAAAATATGGGGTTGAAGGGTGAGTTTCCACTGGGAATTAGGAATTGCTCGTCACTAACAGCCTTAAGCCTTTCGCACAATCACCTAACAGGACCCATCCCCTCGGATGTATCCACGCTAATCCCTTATGCTACCTTCTTAGATCTCTCATATAACAAATTTAATGGGACTATTCCACCTTCTTTCGCTAACTGCACTTACCTCAATTTTCTTTGGCTTCATCACAACAACTTAAGTGGTCACATCCCTCAAGAACTTGGGCAGCTTCCCCTGATCAAATCAGTTTCTGTTGATTACGCAAATAATGGAGAGCTTTGTGGTGGGCCTTTTCCACCATGTTCATTAGACAGTTCACATGATTTCCCTCAATCGTTCAAGCGGGGTCTTGCCATAGGCTATGCTTTTTCACTGACTTCTGTTATTGTCATTTACATGTCCTACTGTGCACCTTGGGAACAATCACACCATCAAAGGAACAACCACCGCAAGAAGGCTAAAGAATTAGGAAGAATTTTTTGGTCCATTGCTGGGAGAAAGACACCTACTCAAGCTCCTGCCCAACACGAATTGCAACCTCTTCAGTTGCAGGAGAAAGTCGTCAAAGAGATTTCTGTAGTAACAGAGAGAATGAAGTCGACGATGAGGTTCAACGAAGTGAGAGATGCAACAGATTGCTTTTCCATAGACAAGGCCATTGGGATGGGGAAAATTGGAATAATGTACGAGGGAAGGCTACCCAATGGTTGGAACCTTGCCATTAAGAGACTATTCGATTCGAAACAATACAAGAGAGAGTTTCTTTTGGAAATAAGAATTCTGGGAAAGTACAGACACAGAAATATAGTTCCCTTACTTGGGTTCTGCGTAGAAGGAAAAGAAAGGATTTTGGTGTACCAGTTCATGTCAAATGGAAGGCTTTCAAAATGGTTGCGTCCTTTAGAAGGTGAAGTTACATTGAAATGGCCTCAGAGGATCAAAGTAGCAATTGGGGTAGCAAGAGGCTTATCGTGGATCCACCACATATGCAACTTGCATGTTGTGCATCTGAATATTAGTTCGGAGTGTATCTTGCTTGATAAGAATTTTGAACCAAGACTGTCCAACTTTGGAAAGGCAAAGTTTGTGAATCCGAACATTGAAGAGGGTGCAAACACAATGTTTTATGTGAGTGATGGGAAGAAGGACGTGTATGACTTTGGTAGTTTGCTATTTGAGCTAATCACAGGGAAAACATTGAAGGAGTTGTCGTGTTCATTCAGTACTGCAACTATCCTATCTGGAAACCCTTCAAACCTTGTTAACGCAATTGATGAATCTCTGATGGGGGAGGGTTTGGAAAACGATGTGTACACTCTCATCAAAGTTGCATGCAAGTGTGTTCGACCATTCGCAGATGAAAGGCCAACGATGCTTGAAGTTTACGACACTATGAAGGATATATGGGGTGAAGGACATTAA 1782 0.4147 MEENSIPFFLFLTYMRKDRLCMSTEMGSQRKRDIFIHVFLYSLLRSLMVGNAVESDIFCLKSIKDSLEDPFNHLSSWNFDNRTEGFICHFVGVLCWHPDENKVWSISLQNMGLKGEFPLGIRNCSSLTALSLSHNHLTGPIPSDVSTLIPYATFLDLSYNKFNGTIPPSFANCTYLNFLWLHHNNLSGHIPQELGQLPLIKSVSVDYANNGELCGGPFPPCSLDSSHDFPQSFKRGLAIGYAFSLTSVIVIYMSYCAPWEQSHHQRNNHRKKAKELGRIFWSIAGRKTPTQAPAQHELQPLQLQEKVVKEISVVTERMKSTMRFNEVRDATDCFSIDKAIGMGKIGIMYEGRLPNGWNLAIKRLFDSKQYKREFLLEIRILGKYRHRNIVPLLGFCVEGKERILVYQFMSNGRLSKWLRPLEGEVTLKWPQRIKVAIGVARGLSWIHHICNLHVVHLNISSECILLDKNFEPRLSNFGKAKFVNPNIEEGANTMFYVSDGKKDVYDFGSLLFELITGKTLKELSCSFSTATILSGNPSNLVNAIDESLMGEGLENDVYTLIKVACKCVRPFADERPTMLEVYDTMKDIWGEGH* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1582 593 Gene3D Phosphorylase Kinase; domain 1 296 408 - -
Vra7g1582 593 PANTHER RECEPTOR-LIKE PROTEIN 55 32 205 - -
Vra7g1582 593 PANTHER RECEPTOR-LIKE PROTEIN 55 207 587 - -
Vra7g1582 593 ProSiteProfiles Protein kinase domain profile. 334 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1582 593 SUPERFAMILY Protein kinase-like (PK-like) 317 583 IPR011009 -
Vra7g1582 593 Gene3D Ribonuclease Inhibitor 54 222 IPR032675 -
Vra7g1582 593 Pfam Protein tyrosine and serine/threonine kinase 335 582 IPR001245 GO:0004672|GO:0006468
Vra7g1582 593 Pfam Leucine rich repeat N-terminal domain 54 96 IPR013210 -
Vra7g1582 593 Gene3D Transferase(Phosphotransferase) domain 1 409 591 - -
Vra7g1582 593 SUPERFAMILY L domain-like 53 256 - -
Vra7g1582 593 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 32 205 - -
Vra7g1582 593 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 207 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1582 Vra-Chr7 34136739 34140059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1582 25 588 Receptor kinase-like Gene Family AT3G28450 32.619 4.33e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Vra7g1582 PK_Tyr_Ser-Thr 7.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1582 - - gmx:102664092 854.358