Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1565 ATGTTGGAGTCTTTAGCTTGGTGCCAAAGCTTTAAGGGATATGACCTTACCAAACAGAAGAGTCCGGGTTGCTCTCATGCTATTTCACGAGTTTATAGAAATTCTATTTTTATGCTTTATTCTGTCAACAAGAAAGTGCCGGTACTGCCACATGGTGCTAGTCATTGGATATTTCATGGGAGTTCTGTGTCAGAAGATTTCTTTAAAAAGCCTCCTCTCTATGCTCCTTTAAGTTCTGGTTGGAAAGGTTTGTATAGGCCGCGTTGGGAAAGGCTGCAAACAAATGTAGCCTATGATGTTGCTGGAGCTGTTGATGTAATCAATGATTTAGGAATGGACACTCTTACTTTCTTGGCTGTGACCGTCATAATTGTGCCTATGTTCAAGTCACTGAAAGCCAGTCCTATACTTGGCTTCTTTTGTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAGTTTTATCCGAATGGGGGATTCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTAAAAGCTCTTGCAAAGTATGCTTTTGGAATGGGATTGGCTCAGGTTTTACTGTCTACTTTAGCATTTACTGCTTTTGAGCTTCCTCCAAATGGAGCTGTTGGAACAAAAATTTTGGAATTCCTTTTCCACTCTAGGCCTGACCTGGTGAACATAAGGAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTTTGTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTAGCAGAGAAAGGTGAGCTTCCAACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTCTGCAGGACTTAGCAGTTGTTCCTCTTTTAGTCATACTTCCTATACTAGAGAGCCAGAATATAACCGAGGGGAGTATTTGGCCTACGCTTGCTCAAGAAAGTTTAAAAGCTTTAGGTGGATTGGGTCTTCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACAATTGCTGGGATTTCTCTAGGCACACAGAATTTGGGCTTTAGTGACACGCTTGGGGCTTTTTTAGCTGGGGCTATTTTGGCAGAGACAAACTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTCCTTGGATTGTTTTTCCTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTACGAGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGTTATAAAGACATTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAATTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCTCTTGAGCTCAACAAACTGCTCATAATTGTTGTTGTATTGTCGATGGCATTAACCCCATTTCTGAACGAAGCTGGAAGAAGGGCTGCTAGTTTTATAGAAGAAAAATCTGATGCTGAGAATAATGAGAAAGCTTTGGAGACTGTTAACTTCAATGCTCGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAATCCATTAGCTTCAGGAGAAGGTGATGAAGTAGGATGGCCTTATGTGGCATTTGATGTGGACCCCAATGTAGTAAAGACAGCTAGAAAAATTGGCTTCCCTATAGTCTATGGGGATGGATCACGTCCTGATGTTCTTCAATCTGCTGGTGTCTCTTCTCCAAAAGCTTTTATGATTATGTACACTGGAAAGAAGAAGACAATTGATGCTGTTCAGAGGCTAAGATTGACATTTCCCGCGATTCCAATCTATGCCAGAGCTCGTGATCTAAAGCATCTATTAGATCTGAAAAAATCAGGTGCAACAGATGCCATTTTGGAAAATGCAGAGACTAGCTTGCACCTGGGTTCTAAGCTGCTGAAAGGCCTTGGTGTGATGTCTGATGATGTAGCATTTTTGAGTCAGCTTATAAGAGATTCCATGGAGCTCCAAGCACAAGAAGCGGTCAGCCAACCTGAAAATCGTGGATTAGATATTATGCAACCCCTGCAGGTGAAAGCTTCTGACTTGAGGGAAGCACGTGTTCCTGCGGCAATAACTTCACCAGAATCTGAATTATCAGAAATGAATCAGAAAGATCAAGCTTCATCAGTTAGAAATCAAAGGGAAGTAGATATTGAAGAACAAGAACATGAACTTAGTGAAGCTGTGAAATTAGAAGGAAATGGTGTTTTACTTAGCAAACAAATTAGTGAAGAAAGCGCTGAGGAGCCCTGA 2373 0.4168 MLESLAWCQSFKGYDLTKQKSPGCSHAISRVYRNSIFMLYSVNKKVPVLPHGASHWIFHGSSVSEDFFKKPPLYAPLSSGWKGLYRPRWERLQTNVAYDVAGAVDVINDLGMDTLTFLAVTVIIVPMFKSLKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVLLSTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNITEGSIWPTLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTIAGISLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSDAENNEKALETVNFNAREPVVILGFGQMGQVLANFLSNPLASGEGDEVGWPYVAFDVDPNVVKTARKIGFPIVYGDGSRPDVLQSAGVSSPKAFMIMYTGKKKTIDAVQRLRLTFPAIPIYARARDLKHLLDLKKSGATDAILENAETSLHLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAQEAVSQPENRGLDIMQPLQVKASDLREARVPAAITSPESELSEMNQKDQASSVRNQREVDIEEQEHELSEAVKLEGNGVLLSKQISEESAEEP* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1565 790 Gene3D - 534 703 - -
Vra7g1565 790 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 86 763 - -
Vra7g1565 790 MobiDBLite consensus disorder prediction 735 749 - -
Vra7g1565 790 Coils Coil 500 520 - -
Vra7g1565 790 MobiDBLite consensus disorder prediction 734 762 - -
Vra7g1565 790 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 535 672 IPR036291 -
Vra7g1565 790 Pfam Sodium/hydrogen exchanger family 117 501 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra7g1565 790 Pfam TrkA-N domain 535 657 IPR003148 GO:0006813
Vra7g1565 790 Gene3D - 109 509 IPR038770 -
Vra7g1565 790 ProSiteProfiles RCK N-terminal domain profile. 534 665 IPR003148 GO:0006813
Vra7g1565 790 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 86 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1565 Vra-Chr7 33849240 33860189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1565 1 776 Inorganic Solute Cotransporters AT4G04850 69.936 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1565 - - gmx:100798214 1325.84