Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1555 ATGGCTTCGAGTGGATGGAGAACCTTTTTATTTTTGTTCATAATCAACACTACAAAAGTTCAACCTCACTCTTTCGATTACCCAAACTTCAATTCATCTTATGCAAAGCAACTAAAGTTGGAAGGTAATGCTTCCACCTCAGGTTCTGCTATCCAACTCACAGTGAACGCAACGGATCCAAAGAACAACGGATCTGGGACAGTAGGAAGAGTGACATATCCAGAGGAGATAAATCTTTGGGACAAGAGTTCAAATGAACTAAAAGACTTCATTACCAACTTTTCCTTTGTTGTTTCCTCAAATCAGAGTACCTATGGAGATGGTTTGGCATTCTTCCTTGCAAGCCCAAATCTTCCATCCACAGACGATGAAAACCTAAGAGGGGGAGGCCTTGGTATAGGGCTTGTTGCTGGCACAGAAAATCTCATTGAGGCTGATTATCAATTTGTGGCAGTGGAGTTTGACACCTACTCAGACAACTGGGACCCAGATGGCGCTCATGTAGGTGTAAATATCAATGCTATGAAGTCTGATATATTCGAGACATGGTGGCCAAATATCACTCAAGGAGAAGTATGTAACTGTAGTATTGTATACAATTCTAGAAGGAATATTTTGGAGGTCTCTTTCACGGGATCCAAGTTAGGTGCTGGGAATGAAACTACTCAGCAACTTTCATACCACGTTAATATCAGAGATCAATTACCAAAGTCAGTTATCGTTGGCATATCAGCTGCGACAGGAGGATATGCTGAGGAACATACCTTGCTCTCATGGTCATTTAGCACAAGTACAAGCCCCCCACCAAGTGTGGTTAATTCAACGAAGAAATGCAAGTTAATTAGTTCAATAATGTTGGAGGGAATTGTAATTGGTACAGTTTTGTTTTTTATTCTGTTAGGGTTGGTGTATATTTTGTTAAGAAGGATGAACAAAGGAAAAGAAAAGCGCACTTCTCATCTGAAGATGGATGATGACTTCCACGAGAGAACTACAGAGATCAGCTATCATGAATTGGCCGCTGCAACCAACAACTTTAAAGAGACACATAAACTAGGCCAAGGTAGCTTGGGCTGTGTTTATAAAGGCTATTTCGAATACTTGAACTCATATGTTGCGATAAAGAAGATATCAGCAGGTTCACCACAGGGTTTGAAGGAATATGCAGCAGAAGTGACGATCGTTAGCCAATTGAGGCACAGGAATTTGATGAAACTCACCGGTTGGTGCCACAAGAAGAATGATCTCTTCTTAATATACGAGTACATGCCAAATGGCAGCTTGGATTCTTGTCTTTTTGGTGGAGAGAAGTTCTTGTCATGGAAAATGAGGTACAATATAGCTCTTGGCTTGGCATCAGCATTGCTTTACCTTCAGGAAGAATGGGAGAAATGTGTGCTTCACAGGGACATCAAATCAAGCAACATATTGCTGGACTCCAACTTCAACCCTAAGCTTGGGGACTTTAGCCAGGCAAGGCTGGTGGATCATGATAAAGGGTCAGAAACGACGGATGTTGCTGGGACCATGGGTTACATAGCTCCTGAATGTATGAACACAGGCCAGGCTCGAAAGGAATCTGATATATTCAGTTTTGGAATTGTTGTGTTGGAGATAGCCACTGGAAGAAAAGCCGTTCAACGTGAAGACATGGAGGGTGAAGTATCGGTTGTTGAGTGGGTATGGGGGCTGTATGGATTGAGGAATCTCCTTGCAGCAGTAGATCCAAAGCTGCACGGGGAATTTGATGTGCAGCAAATGGAATGCTTAGTGGTTGTTGGTCTTTGGTGTGCTAATCCAGATTTTGAATGCAGACCAACCATAAGGCAAGTGATGAAGGTGCTTAAGTTTGAAGCTTCTTTGCCAATTCTCTCACAGCAGATCCCATGCAAGCCTCTTTCTGTCCAATAA 1911 0.4233 MASSGWRTFLFLFIINTTKVQPHSFDYPNFNSSYAKQLKLEGNASTSGSAIQLTVNATDPKNNGSGTVGRVTYPEEINLWDKSSNELKDFITNFSFVVSSNQSTYGDGLAFFLASPNLPSTDDENLRGGGLGIGLVAGTENLIEADYQFVAVEFDTYSDNWDPDGAHVGVNINAMKSDIFETWWPNITQGEVCNCSIVYNSRRNILEVSFTGSKLGAGNETTQQLSYHVNIRDQLPKSVIVGISAATGGYAEEHTLLSWSFSTSTSPPPSVVNSTKKCKLISSIMLEGIVIGTVLFFILLGLVYILLRRMNKGKEKRTSHLKMDDDFHERTTEISYHELAAATNNFKETHKLGQGSLGCVYKGYFEYLNSYVAIKKISAGSPQGLKEYAAEVTIVSQLRHRNLMKLTGWCHKKNDLFLIYEYMPNGSLDSCLFGGEKFLSWKMRYNIALGLASALLYLQEEWEKCVLHRDIKSSNILLDSNFNPKLGDFSQARLVDHDKGSETTDVAGTMGYIAPECMNTGQARKESDIFSFGIVVLEIATGRKAVQREDMEGEVSVVEWVWGLYGLRNLLAAVDPKLHGEFDVQQMECLVVVGLWCANPDFECRPTIRQVMKVLKFEASLPILSQQIPCKPLSVQ* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1555 636 Pfam Legume lectin domain 24 270 IPR001220 GO:0030246
Vra7g1555 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Vra7g1555 636 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1555 636 CDD lectin_legume_LecRK_Arcelin_ConA 24 264 IPR001220 GO:0030246
Vra7g1555 636 ProSitePatterns Legume lectins beta-chain signature. 150 156 IPR019825 -
Vra7g1555 636 SUPERFAMILY Protein kinase-like (PK-like) 328 617 IPR011009 -
Vra7g1555 636 CDD STKc_IRAK 352 616 - -
Vra7g1555 636 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Vra7g1555 636 SMART serkin_6 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1555 636 PANTHER LECTIN RECEPTOR KINASE 28 630 - -
Vra7g1555 636 ProSiteProfiles Protein kinase domain profile. 346 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1555 636 Gene3D - 21 270 - -
Vra7g1555 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 268 IPR013320 -
Vra7g1555 636 PANTHER - 28 630 - -
Vra7g1555 636 Gene3D Transferase(Phosphotransferase) domain 1 423 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1555 Vra-Chr7 33608386 33610296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1555 9 630 Receptor kinase-like Gene Family AT5G10530 42.610 9.95e-161 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra7g1555 Pkinase 4.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1555 - - cam:101492002 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1555 7 33608386 33610296 Vra10g1455 10 19591338 19593299 PCT