Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1554 ATGGATGCTTCTGGATTACTGTTTAGGAGGATCATTCTGTTCATCCTAATCATCGCCATTGCAATAACAAATGCTCACACTCAGTCTTTTGAGTGTCTCAGCTTCAGTTCAACGTGTATAAAGCACCTTAAGCTAGAAGGGAGTGCTTCTAGCTCAGGTTCTGCTATCCATCTCACAGAAGAGAACGGTATGTTCCCAAGCAAATCGTTTGGGAGCGCAGGACGAGTCACGTATGCTGAACGAATAAACCTTAGGGACAAGAGTTCAAACGAACCAAGAGACTTCATTACCAACTTTTCCTTTGTTGTTTCCTCAAATCAGAGTATTTATGGAGATGGTTTGGCATTCTTCCTTGCAAGCCCAAATCTTCCATCCACAGACAAGTTACAGCTAAGAGGAGGAAGTCTTGGGGTTGGCCTAACGGATGGTGATCGTGAGCTTTTCCGGTTAGATTATCGATTCCTGGCAGTGGAGTTTGACACTTTCAGAAACCCATGGGACCCAGTTGGTGCTCATGTAGGCATAAATATCAATGACATGGAGTCTAAAATTTTTGAGACATGGTGGATAAATATTACACATAGGAAGGTTTGTAACTGTAGAATTGTATACGATTCTAGGAACAGTATTTTGAATGTTTCTTACACTGGATACAAATTAAGCCATGGGAAAATGAGAAAGACTACACAACATCTTTCATACTCTGTTGATATAAGGCAGAAATTACCAGACTCCGTTGTTGTGGGCATATCAGCTGCAACTGGAAAATATTCTGAACAGCATACCTTGCTCTCATGGTCGTTTAGCATCACCCCACCAAGTACGGACGATAAAGAGAAGGAAAGGAAGCCTGTCATCATAACATTGAAGGGAATAGGAATTGGTGCTGTCTTGTTTTTGAGTTTGCTAGGAATGGTTGAGATTTCATTGAGGATGATGACCAAGAGAAAGGAAGTAGGTCACACTTCAAAGGCCACTTCTGATCCAGAGATGGATGATAAATTAGAAATGAGCACTGGACCAAAGAAGATTAGCTATCAAGAATTGGCAACTGCAACCAACAACTTTGATGAGACGAATAAGCTTGGGCATGGAGGGTTTGGTGGTGTTTATAAAGGCTATTTCAAAGACTCCAACACCTATGCTGCTATAAAGAGGATATCAGCAGATTCTAGGCAGGGTGTAAAACAATACACTGCAGAGGTGACGATCATTAGCCAATTGAGGCATAGGAATTTGGTGAAACTCACTGGTTGGTGCCACAAGAAGAATGATTTTCTCTTGATATACGAGTACATGGAAAATGGCAGCTTAGACTCTAAACTTTTTCGGGGAGAAAGTATATTACCCTGGGAAATGAGGTACAACATAGCGTTGGGCTTGGCCTCAGCATTGCTTTACCTACAAGAAGAATGGGAGAAATGTGTGCTTCATAGAGACATCAAATCAAGCAACATAATGTTGGACTCCAACTTCAATCCCAAGCTTGGTGACTTTGGCCTAGCTAGGTTGGTGGATCATGATAAAGGGTCAGAAACCACAGAGGTGGCTGGGACCATGGGTTACTTAGCTCCTGAATACCTGAACACAGGCCAGGCTCGAAAGGAGTCAGATATATTCAGTTTTGGGGTTGTTCTGTTGGAGATAGCAACTGGAAGAAAAGCCATTCACCACAAACACATGGAGGGTGAGGTATCAGTGGTTGAGTGGGTGTGGAAGCTATACGAATTGAGAAATCTGCTTGCAGCAGCAGATGAAAACCTACGTGGGGAATTTGATGTGCAGCAAATGGAATGCTTACTGGTAGTTGGTCTTTGGTGTGCTAATCCAGATTCAGCATCCAGACCGGCAATAAGGCAAGTGATTAACGTCCTTAGCTCTGAATCTTCTTTACCAATTCTTCCACTGCAGATGCCAGTACAAGGCTGTTCATGA 1935 0.4269 MDASGLLFRRIILFILIIAIAITNAHTQSFECLSFSSTCIKHLKLEGSASSSGSAIHLTEENGMFPSKSFGSAGRVTYAERINLRDKSSNEPRDFITNFSFVVSSNQSIYGDGLAFFLASPNLPSTDKLQLRGGSLGVGLTDGDRELFRLDYRFLAVEFDTFRNPWDPVGAHVGININDMESKIFETWWINITHRKVCNCRIVYDSRNSILNVSYTGYKLSHGKMRKTTQHLSYSVDIRQKLPDSVVVGISAATGKYSEQHTLLSWSFSITPPSTDDKEKERKPVIITLKGIGIGAVLFLSLLGMVEISLRMMTKRKEVGHTSKATSDPEMDDKLEMSTGPKKISYQELATATNNFDETNKLGHGGFGGVYKGYFKDSNTYAAIKRISADSRQGVKQYTAEVTIISQLRHRNLVKLTGWCHKKNDFLLIYEYMENGSLDSKLFRGESILPWEMRYNIALGLASALLYLQEEWEKCVLHRDIKSSNIMLDSNFNPKLGDFGLARLVDHDKGSETTEVAGTMGYLAPEYLNTGQARKESDIFSFGVVLLEIATGRKAIHHKHMEGEVSVVEWVWKLYELRNLLAAADENLRGEFDVQQMECLLVVGLWCANPDSASRPAIRQVINVLSSESSLPILPLQMPVQGCS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1554 644 Gene3D Transferase(Phosphotransferase) domain 1 433 641 - -
Vra7g1554 644 Pfam Legume lectin domain 29 281 IPR001220 GO:0030246
Vra7g1554 644 SUPERFAMILY Protein kinase-like (PK-like) 339 631 IPR011009 -
Vra7g1554 644 ProSitePatterns Legume lectins beta-chain signature. 155 161 IPR019825 -
Vra7g1554 644 CDD STKc_IRAK 362 625 - -
Vra7g1554 644 PANTHER LECTIN RECEPTOR KINASE 17 641 - -
Vra7g1554 644 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Vra7g1554 644 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1554 644 Gene3D Phosphorylase Kinase; domain 1 341 432 - -
Vra7g1554 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Vra7g1554 644 SMART serkin_6 356 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1554 644 Gene3D - 25 290 - -
Vra7g1554 644 PANTHER - 17 641 - -
Vra7g1554 644 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1554 644 CDD lectin_legume_LecRK_Arcelin_ConA 72 271 IPR001220 GO:0030246
Vra7g1554 644 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 276 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1554 Vra-Chr7 33590306 33592240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1554 1 640 Receptor kinase-like Gene Family AT5G10530 43.511 2.67e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra7g1554 Pkinase 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1554 - - cam:101492002 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1554 7 33590306 33592240 Vra7g1554 7 33590306 33592240 ECH
Vra10g1458 10 19607350 19609352 Vra7g1554 7 33590306 33592240 PCT