Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1551 ATGGCAGCATCTTCCTACTATAAGAAAAGTTATGTAAGTGCTTGTTTTCATGTAACATTAACACTCTTGCTTCTTGTAACACCTCATGCAGCTTCATTGGAATTCAACTATCAGCAATTTGGTGACACTGGAAACGTCTTCAATACCTCGGGAGATGTTCAAGCTGCGCAAGGAATCCTCCAACTCACCGAGTATAAGCCAGATAGTTATGGTAGAGTCGTATATAACAAACTATTGCATCTTTGGGACAAGAGTTCGGGAAAGGTTGCAGATTTCACTACCCATTTCTTCTTTACCATCAACACCCCAAATAAAACCTATCATGGAGATGGAATCACCTTCTTTCTGGCAGATCCAAAGTTTCCAGACTCCAAAATAGATGGAAGTGGTATTGGTCTTGCCAGCCGTGAGCAACTGAGGTCTATAAATTACGCAAAGGACTTTCCTTTTGTAGCAGTGGAATTTGATACCTTGGCTAATGACTGGGATCCGAAATATGATCATGTGGGTATCGATGTCAATGCCATTAACACTACTCACACTACAGAGTGGTACACTAGCATGGATCAAAGAGGGTATGATGCTGAAATTAGTTTTGAGTCTGTGTCAAACAGATTAAGTGTCACCTTCACCGGATATAAGGATAATGCCAAAATTGAACAGACCTTATTCGCAGTGGTCAATTTGAGTGATATCTTACCTGAATGGGTTGAATTTGGTTTCTCTTCGGCAACAGGATATACTTATGAGGAACATACTCTTAGTTCATGGTCCTTCAGTTCTAGTTTGGAGATGGAACAAGACAAGGGTGGAAGCAAAAGAGGGCTGGTGATAGGGCTGAGCGTTGGACTTGGTGTAGGTGTTTTAATTGCTATTGTGGGGGTAACTTTTCTTGTGAGATGGATGACGAGGACTAGAGGAATAGAAGATGTCTCCCTTTTTGACCATGCTATGGACAATGATTTCGAAAAAGTCTCTGTACCCAAGAAATTTTCTTATGAAGAACTAGCCAGAGCAACCAATAACTTCGCAACAGAAAACAAAATTGGACAGGGAGGTTTTGGCGCTGTCTACAGGGGATTTATAAGAGAGTTGAACACCTATGTTGCCATTAAGAAGGTATCTCGTGGATCGAGACAAGGGGTGAAAGAGTATATGTCTGAAGTAAAGATCTTTGGTCAACTGAGGCATAAGAATTTGGTTCAACTCTTTGGGTGGTGCCATGAGCATGAGGACCTGCTGCTGATTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTCAAGGGAAAAGGCCTGCTGACATGGAAGGTGAGATACAATATTGTGAGAGGGTTGGCATCAGCATTGTTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGAGACATAAAATCCAGCAATGTTATGTTGGATTCTAATTTTAATACAAAGCTTGGTGATTTTGGGTTAGCCAGACTAATGGATCATGAGATAGGATCAAAAACAACTGTTTTAGCAGGAACAATTGGGTATTTGCCTCCTGAAGCTACCACAAGAGGAAAGGCCAGTAGGGAATCTGATGTATTCAGTTTTGGAGTAGTTGCTTTGGAGATAGCATGTGGTAGAAAAGCAATTGAATCTAATATGAAGGAAGAACAGATGTATTTGGTGGATTGGGTTTTGGAACTCCATAGCATTGGTGAAGTCCTTAAAGCTTCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGACGTTAATGATAGTTGGCCTTTGCTGCACTCACACAGATTACCTCATGAGACCTACCATTAGGCAAGTTGTTCAGATGCTTAATTTTGAAGCTCCATTACCCATTCTCACACAAAGGGGATCAGTCCATAATGCATCTTTCAGTTCTATGGCTTCTAGGACTCTTGCTTTTGCAAATAACCAACCTCTGTCTTCAACTTCAAGCAGCAGTGTATTCACGGGGTCCTCACAATCCACCACAACTCTTGAAATCATTACTCCAACAGCTGCAAATTTGCATACCTACTGA 2043 0.4112 MAASSYYKKSYVSACFHVTLTLLLLVTPHAASLEFNYQQFGDTGNVFNTSGDVQAAQGILQLTEYKPDSYGRVVYNKLLHLWDKSSGKVADFTTHFFFTINTPNKTYHGDGITFFLADPKFPDSKIDGSGIGLASREQLRSINYAKDFPFVAVEFDTLANDWDPKYDHVGIDVNAINTTHTTEWYTSMDQRGYDAEISFESVSNRLSVTFTGYKDNAKIEQTLFAVVNLSDILPEWVEFGFSSATGYTYEEHTLSSWSFSSSLEMEQDKGGSKRGLVIGLSVGLGVGVLIAIVGVTFLVRWMTRTRGIEDVSLFDHAMDNDFEKVSVPKKFSYEELARATNNFATENKIGQGGFGAVYRGFIRELNTYVAIKKVSRGSRQGVKEYMSEVKIFGQLRHKNLVQLFGWCHEHEDLLLIYEFMENGSLDSYLFKGKGLLTWKVRYNIVRGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFNTKLGDFGLARLMDHEIGSKTTVLAGTIGYLPPEATTRGKASRESDVFSFGVVALEIACGRKAIESNMKEEQMYLVDWVLELHSIGEVLKASDPSLYGHFDEKEMETLMIVGLCCTHTDYLMRPTIRQVVQMLNFEAPLPILTQRGSVHNASFSSMASRTLAFANNQPLSSTSSSSVFTGSSQSTTTLEIITPTAANLHTY* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1551 680 ProSitePatterns Protein kinases ATP-binding region signature. 349 373 IPR017441 GO:0005524
Vra7g1551 680 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Vra7g1551 680 ProSitePatterns Legume lectins alpha-chain signature. 233 242 IPR000985 -
Vra7g1551 680 SUPERFAMILY Protein kinase-like (PK-like) 327 622 IPR011009 -
Vra7g1551 680 CDD lectin_legume_LecRK_Arcelin_ConA 33 254 IPR001220 GO:0030246
Vra7g1551 680 Gene3D - 30 279 - -
Vra7g1551 680 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1551 680 CDD STKc_IRAK 349 613 - -
Vra7g1551 680 ProSitePatterns Legume lectins beta-chain signature. 151 157 IPR019825 -
Vra7g1551 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 265 IPR013320 -
Vra7g1551 680 Pfam Protein kinase domain 344 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1551 680 PANTHER - 17 677 - -
Vra7g1551 680 PANTHER LECTIN RECEPTOR KINASE 17 677 - -
Vra7g1551 680 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Vra7g1551 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Vra7g1551 680 Pfam Legume lectin domain 32 269 IPR001220 GO:0030246
Vra7g1551 680 ProSiteProfiles Protein kinase domain profile. 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1551 Vra-Chr7 33485023 33487637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1551 18 627 Receptor kinase-like Gene Family AT5G10530 46.019 4.00e-170 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vra7g1551 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1551 - - gmx:100817213 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1551 7 33485023 33487637 Vra7g1551 7 33485023 33487637 ECH
Vra7g1551 7 33485023 33487637 Vra10g1458 10 19607350 19609352 PCT