Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1521 ATGAACGGCAGCGGTGGAGGAAACCGAGCGGAGGCGGAGCGGTGGCTGTACACTGCGAACAAGCTGCTAAGCGCGCGGGATCTGCACGGGGCGCGCTCCTTCGCGATCCGCGCGCGCGAGTCCGACCCGACTTATGAGGCCTCCGAGCACCTCCTGACGGTGATCGACACGCTCCTGGCGGGAGAGTCGCGAATCAGCGACCACCTCTGCGACTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATGGACCACATCTCCTCCCAGTATCGCCGCCTCGCCCATCTTCTCGATCCCAGCCGCAACCTCTTTGCCTTCGCCAGCCACGCCTTGTCCCTGGTCAACGACGCCTGGTCCGTACTCTCTAATCCTTCCAAGAAAGCCATGTACGACAGCGATCTCCGGCTGCTCACCACTCCGCCGCCGCATGCCCCGTCGCGTCCTCTTCCTCCTGCACAGCCCCAACCCACGCCCAGGCGAAACCCTAGATCGAGGGATGATTCGGCTGAGACGACTCGGCCGAACTCCAATCGTACCGAGTACGCTGAGTCGACTCGGCAGACAGGAACCGTCGAAACAGACGGTGGAACGAGTTTCTGGACCTCGTGCCCTTACTGTTACGTTTTGTATGAATACCCGAAGGGGTACGAGGAGTGTACCTTGAGGTGTCAGAGTTGCAGGAGAGGGTTTCATGCGGTGGTGATACGGACGCCACCGTCGTTGAATGGGAAAGACGGTTCCTATTGCAGTTGGGGTTTTTTCCCGTTGGGGTTTTCTGGGGATTCGAAGGACGTGAACGGGTTATCCTCCAATTGGAACCCGTTTTCCCCTTTGTTTCCCTGCCCTTTGAAGGGGTCTTCCTATAGTAAGCCTAAGAGGAACTGGGATTACTATGATGAAGAGGCTGCCGCCGCGTTTATCGAGTTATCCGATCCCAGTGACGACGATTCCGGTGATGGAGACTGGAGGGTTGTGAAGAGGAGTGGGAGGAAGAAGACTAGAGTTAATAAAAATTCTGGTGATGGAAGGAGGGAAACTGTGGGGAGACCTAGGACGGGTGTCCATACAGGGCATGAGAATGTGGGTTCCAGTGATCCTGCTACAGCTGCTGGTGCTCCTGCTAATGCTAGTGCCAAAGCTAATTCTAGTGCCAAATCTAATGCTAATGCCAAAACCAATGCTAATGTCAAAGCTAATGCTGCCTCTGTTATGCCTTCTGGTGCAAGGGCGGAGTCTAGTAAGAAGGCTGCGTTGGGTGGTTCGAGGAGGAGGGGTGCTGGAAACTTGGGAAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCGCGATCGTGAAGGGAATGCTGCTGGACATGCTGAGGATAATATTGAAGGTATTGGGTTTTTTGAAGGCCTTGATGAATTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGTTAAGGGTCATTAG 1491 0.5506 MNGSGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRISDHLCDWYGILQILRYTTNMDHISSQYRRLAHLLDPSRNLFAFASHALSLVNDAWSVLSNPSKKAMYDSDLRLLTTPPPHAPSRPLPPAQPQPTPRRNPRSRDDSAETTRPNSNRTEYAESTRQTGTVETDGGTSFWTSCPYCYVLYEYPKGYEECTLRCQSCRRGFHAVVIRTPPSLNGKDGSYCSWGFFPLGFSGDSKDVNGLSSNWNPFSPLFPCPLKGSSYSKPKRNWDYYDEEAAAAFIELSDPSDDDSGDGDWRVVKRSGRKKTRVNKNSGDGRRETVGRPRTGVHTGHENVGSSDPATAAGAPANASAKANSSAKSNANAKTNANVKANAASVMPSGARAESSKKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGVRDREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1521 496 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 393 496 - -
Vra7g1521 496 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 5 393 - -
Vra7g1521 496 MobiDBLite consensus disorder prediction 377 402 - -
Vra7g1521 496 Gene3D DnaJ domain 68 140 IPR036869 -
Vra7g1521 496 MobiDBLite consensus disorder prediction 336 354 - -
Vra7g1521 496 MobiDBLite consensus disorder prediction 176 195 - -
Vra7g1521 496 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Vra7g1521 496 Pfam DnaJ domain 71 133 IPR001623 -
Vra7g1521 496 MobiDBLite consensus disorder prediction 143 160 - -
Vra7g1521 496 CDD DnaJ 71 125 IPR001623 -
Vra7g1521 496 SUPERFAMILY Chaperone J-domain 68 136 IPR036869 -
Vra7g1521 496 MobiDBLite consensus disorder prediction 311 430 - -
Vra7g1521 496 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 393 496 - -
Vra7g1521 496 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 393 - -
Vra7g1521 496 MobiDBLite consensus disorder prediction 137 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1521 Vra-Chr7 32895222 32897046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1521 11 495 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.629 5.83e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1521 - - var:108324594 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1521 7 32895222 32897046 Vra10g1474 10 19712111 19713973 PCT