Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1506 ATGGCAACCGTTTCGCGCTTGTTCGTGATCCCAGCGGCGAGGCCCGTTCTCGCCAGAACCATATTCTTCATGTCCTCTTTCTCAGCTCGCACGTTCGAACCGTGCGAGTCACCTTCCCCTGCGCGCTCCCAGGAAGAATCGCGAAACGTGAGGGTTTGGGCATGGTGGGACTTCAAGAACTGCCACGTGCCCCCGGATTTCGACGCTTCCAAAGTCGCACCGGCAATAATGGAGGCAGTGAGAGCAAACGGAATCAAAGGACCTCTCAGCATCACCGCTTTCGGCGACGTTCAACAACTCCGCAGGGCTCATCAGGAAGCACTCGCCTACACCGGCGTTCGCTTCATCCACGTCTCTGACGAGGGAAGAAACAGTGCCGACATTCTCGTTGATCTAATGTATTGGGTTTCTCAGAACCCTCCGCCGGCGCACATATTTCTGATATCCGGCGATAGAAACTTCGCTGGCACGTTACACCGCTTAAGAATGAGTAATTACAATATATTGCTCGCTACGCCGGAGAAAACTCCCAGTGTTCTCCACAGTGCTGCCACGATAGCCTGGATGTGGGATTCGTTGCTCAACGGAGAAAATCTTACTGGAAATGTCCTCAACCACCCTCCTGACGGGCCTCTTGGCTCTTGGTATGGAAGCTACAAAGAGCCGGTGAGGGTGGCGGATCTGGCGACGGAGGAACCGGTCACAGTTGCAGCTCTGCAGGCTACCTCGTTGCCCAATGTGGAGGTCTGCCCTTCTAAGAGCACGGTTCCTAAGTCGGTTTTGGGTAAGATTTGCAATATTTTGAGTTTGCATCCCGAAGGAATGGAGATTGCTCATCTTTGCGCTGAGTTGATGAAAATTGATGCGTGTTTGGATAAGAACTGGTATGGACATAAAAAGTTTTCCCGCTTTCTGTTATCGTTGCCACAGGTAGATCTTCGGTCTATTAGTGATGGTTCTCTTCGTGTACATTTGGTTCCTGTGCAATCCATGGAACCATGTAAAAGCTCTTTGGGATCAACAGTTTCTGATGCTACGAATGAGGAGAAACGATGTGCAGCGGCACCAAAAGTAAATGGCGAGGGTAAAAGTAAGGTTAGGGATGCTGACAAGAAATTGTCAAATGCTACGAATGAGGAGAAACGATGTGCAGCGGCATCAAAGGTAAATGGCGAGGCTAAAAGTAAGGTTAGGGATGCTGACAGGAAATTGGCAAATGCTACGAATGAGGAGAAACGATGTGCAGCGGCATCAAAGGTAAATGACGAGGCTAAAAGTAAGGTTAGGGATGCTGATAGGAAATTGTCAAATGCTGAAAGGAGTATGGGGGACTATTTAAAATCAGTACAACCGGGGCCTTCAAAAGGGAGACCTGTTGAGGAAAATGAGTTGCGGAAGTCTGCTGTGGCTTGTGACAGGTTTGTGGATGTGGCTAATGCTCCACAGTCAGAAACTGAACTGCCACATGAGGACAGCAAAGATTCCAAAACTAAGATGGATACCCTAAAAAAGAGTTCTAAAAAATTGTCTGATAATAACACTGGTAGGTCTAAAGTTGCTGGTATGGAAAAACATACTACTAAAGATAATCTCTCTGCTGGAAATGATCAATCGATGGTGGAAAACAATGTTATGGCTAATTATGAGTCTGGAAATTTTGAAGCAAAGAATGAATGTGAGAATCTAACTAGTAAGGAGGTTGACGAAGTTTTTCCAAGCCTATCTACACCAATTGATTGCTCTGAGGCTGCCCAAAAGCCTGGCGGAAGCGCTGAAACTAATAAAACAAGTCCAACACTGTTTCACTGGATTAAACGGTGGTGGCCATTTGGGAAAAACAATGAAAAATATGATGATTTGACCGCTCATCAAAAGGAGGGAGTTAGTCATGTTGAGGATTCCAAGTTATCTGAATTGGAGAAGACTGTTAGTCAATCTGAAGAGGTCAAATCATCTGAACTGGATCACACTTTAAGTCAATCTGAAGAGCCCAAGCTACCAGAACTGAATCAGAATTCTGGTCATTCAGGAAAGCCTGAGTTAAAATATAATGATTTGACGGCTCATCAAAGGGAGGGAGTTAGTCATGTTGAGGATTCCAAGTTATCTGAACTGGTGCAAACTGTTAGTCAATCTGAAGAGGTCAAATCATCTGAACTGGATCACACTGTAAGTCAATCTGAAGAGCCCAAGCTACCAGAACTGAATCAGAATGTTGGTCATTCCGGAAAGCCTGAGTTATTTTCCAGTGCTTCCTTTTGGAATGATATGGAATCTTTTATGTTTGCACCCAAAGGATCACTTCTTTTCTCCCAGTCAAGAAGCAGGGAGGATGTGGCGCAAAGGTTACAAGATGGAGGACCCCTGCTTCTCAGATCACTTCCCAAAAAAGATATCCTTCAATTGGTTGATATGTTAATAGCAGACAAAAAATGGTTGGAGGAAAGGCCGTCCCAAGCATTTCCTTTTAAGCTAACTCAGCCAGTTCATAAGAATTTATCGGTGGACCAATCCCGTAGTGGCAATGGTTTGAGATCGATCTTTCTACGCAGATCATCACAATCTCTAGAACATGATGTGGGGAAACACAATCAGAGTGTTCCTCATACACCAATTTCTGCAGCGGCTGTTGAAACAAAACATTTTGAGAGATCTAGAAATGATATATTGGATGACTGTCAGAAACTTGTTAATGAGATATTAAGGGAACACCCAGAGGGATATAATATTGGTGCTTTCCGAAGACTATTTGTTGATAAGTATGGCTATCATCTTGATTTACAGAAGCTTGGTTATCAAAAATTGGTAGCCTTGCTACAGATAATGCCTGGGGTTAAATTGGAGTCTACTTACATTTATCCTTCTGTTCCTGCTGTATGTGATTCTGATTCGGATACTTCTATCCTCAAAAGTAAAGCAACAGCTGATAATCATGCAGTCTCCAACTCAGATAGCGAATTATCTGAGTCAACCCTGAAAGATGATGACATGGAATCTGAATGGGAGGAGTTGGGTCCTGTTTCTATAAAAAATTTTGACAAGAGTGGTTTGGGTTATGAACTTGTTGTATCAGATGACGATACTTCTGCATCTGAAGGAGACCACTCTTATTTAACTCAATCTGAAGAGCAGAGGAAATCAATTTGTAATGAACGGGACAGTTCGTTTTGGCAAACTATGGATTTGTGGCACAGCTGCAAGGAAGGAGAGAATGGTGTCAAGAAGTCAGACAATGTTGACAGCTTGAGTGTTTCTGTGGCTCATATTTTAAATTCATCCCCTGACCCAGCCATTGTTTTCCCTTCCAAAACATCAAATTGCAGAGATAAACAAAGGTCTCACAAGAACTATTCTTTCGTTGTTGATCAAGTCTTACATGACAAGGACAAGCTGATTGGTGACTTCAAGAAAACTGATGAGTCAATGCAAAAACAGAGTAGTTCCTGCTGCAAGTAG 3456 0.4395 MATVSRLFVIPAARPVLARTIFFMSSFSARTFEPCESPSPARSQEESRNVRVWAWWDFKNCHVPPDFDASKVAPAIMEAVRANGIKGPLSITAFGDVQQLRRAHQEALAYTGVRFIHVSDEGRNSADILVDLMYWVSQNPPPAHIFLISGDRNFAGTLHRLRMSNYNILLATPEKTPSVLHSAATIAWMWDSLLNGENLTGNVLNHPPDGPLGSWYGSYKEPVRVADLATEEPVTVAALQATSLPNVEVCPSKSTVPKSVLGKICNILSLHPEGMEIAHLCAELMKIDACLDKNWYGHKKFSRFLLSLPQVDLRSISDGSLRVHLVPVQSMEPCKSSLGSTVSDATNEEKRCAAAPKVNGEGKSKVRDADKKLSNATNEEKRCAAASKVNGEAKSKVRDADRKLANATNEEKRCAAASKVNDEAKSKVRDADRKLSNAERSMGDYLKSVQPGPSKGRPVEENELRKSAVACDRFVDVANAPQSETELPHEDSKDSKTKMDTLKKSSKKLSDNNTGRSKVAGMEKHTTKDNLSAGNDQSMVENNVMANYESGNFEAKNECENLTSKEVDEVFPSLSTPIDCSEAAQKPGGSAETNKTSPTLFHWIKRWWPFGKNNEKYDDLTAHQKEGVSHVEDSKLSELEKTVSQSEEVKSSELDHTLSQSEEPKLPELNQNSGHSGKPELKYNDLTAHQREGVSHVEDSKLSELVQTVSQSEEVKSSELDHTVSQSEEPKLPELNQNVGHSGKPELFSSASFWNDMESFMFAPKGSLLFSQSRSREDVAQRLQDGGPLLLRSLPKKDILQLVDMLIADKKWLEERPSQAFPFKLTQPVHKNLSVDQSRSGNGLRSIFLRRSSQSLEHDVGKHNQSVPHTPISAAAVETKHFERSRNDILDDCQKLVNEILREHPEGYNIGAFRRLFVDKYGYHLDLQKLGYQKLVALLQIMPGVKLESTYIYPSVPAVCDSDSDTSILKSKATADNHAVSNSDSELSESTLKDDDMESEWEELGPVSIKNFDKSGLGYELVVSDDDTSASEGDHSYLTQSEEQRKSICNERDSSFWQTMDLWHSCKEGENGVKKSDNVDSLSVSVAHILNSSPDPAIVFPSKTSNCRDKQRSHKNYSFVVDQVLHDKDKLIGDFKKTDESMQKQSSSCCK* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1506 1151 MobiDBLite consensus disorder prediction 973 999 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 709 741 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 354 378 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 479 535 - -
Vra7g1506 1151 Pfam OST-HTH/LOTUS domain 261 321 IPR025605 -
Vra7g1506 1151 Pfam OST-HTH/LOTUS domain 890 948 IPR025605 -
Vra7g1506 1151 Coils Coil 390 410 - -
Vra7g1506 1151 PANTHER LIMKAIN B LKAP 23 1087 IPR024768 GO:0005777|GO:0010468|GO:1903231
Vra7g1506 1151 Gene3D - 884 951 IPR041966 -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 627 662 - -
Vra7g1506 1151 Coils Coil 421 441 - -
Vra7g1506 1151 CDD PIN_limkain_b1_N_like 51 173 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 392 440 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 663 678 - -
Vra7g1506 1151 ProSiteProfiles OST-type HTH domain profile. 256 327 IPR025605 -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 627 681 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 354 462 - -
Vra7g1506 1151 Pfam NYN domain 51 184 IPR021139 GO:0004540
Vra7g1506 1151 PANTHER EMB|CAB71880.1 23 1087 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 486 511 - -
Vra7g1506 1151 ProSiteProfiles OST-type HTH domain profile. 889 963 IPR025605 -
Vra7g1506 1151 CDD LOTUS 890 945 - -
Vra7g1506 1151 MobiDBLite consensus disorder prediction 973 987 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1506 54 196 C2H2 Transcription Factor Family AT5G61190 42.069 5.57e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1506 - - var:108320919 2173.28