Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1493 ATGGAAACCAAACGCATTCCAATGGATATGGTCATAGATTGTGTCTCCGGTGCGCACTTCTCTGGTTGGCAACCTTCAACGACGTCGTCTTCTTCTCCAACTTCCTCTCATCAACCCTTCATCATTGGTGTCGCTGGAGGCACTGCATCGGGGAAAACCACTGTGTGCGACATTATCATTCAGCAGCTGCAAGATCACAGAGTTGTGCTCGTTTGTCAGGATTCATTCTACCGCGGTTTGACGAATGACGAGTTGAAACGCGTTCATGAGTATAACTTTGATCATCCTAATGCATTTGACACAGAGCAACTAGTAGAAACCCTCGGTCAGCTCAAATCTGGACAGTCGGTTCAGATTCCCATATATGATTTCAAGCTTCATCAGAGATCTACCGACAGATCTCGACAGGTCAATGGATCTGATGTAATCATTATGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGATGCAGATCCAGACGTGAGGCTTGCCCGCAGAATAAAACGTGATACAGTTGAAAGGGGTAGAGATATACAATCGTATGCAAAATTTGTTAAGCCTGCCTATGAAGATTTTATTCTTCCATCCAAAAAATACGCTGACATCATAATACCTCGAGGGGGAGAGAATCGTGTAGCAATTGATTTGATTGTTCAACATATCCGTACTAAGCTTGGCCAGCATAACCTCTGCAAAATATATCCGAATTTGAATGTTATACAGTCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGTGATAGGGACATATCAAAGCATGATTTCATTTTTTACTCAGATCGGCTAATTCGATTGGTAGTGGAACATGGTCTTGGTTACTTGCCGTTTACAGAGAAACCAGTAATCACACCTACAGGCTCAATTTATACTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCGATTATTCGAAGTGGGGAGAGTATGGAAAATGCCTTCCGTGCTTGCTGTAAAGGAATAAAGATTGGAAAAATTCTCATTCACCGCGATGGTGACGAAACCCAGCTTATTTATGAGAAGCTTCCTAAAGATATTTCGGAGAGACATGTTCTTCTCATGGACCCAGTACTCGGGACAGGTAACACAGCCAGCGAAGCAGTCGAGCTTCTCATAAAGAAAGGAGTTCCAGAGTCCCAGATAATATTCCTTAACCTCATTTCTGCTCCTGAGGGCATACAATGTGTTTGTAAACGTTTTCCGCATATGAAAATTGTCACATCAGAGATCGAAGAAGGATTAAATGACCAGCTCCAGGTCATACCAGGGTTAGGCCAATTTGGAGACCGTTACTTTGGTACGGACGACTCCTAG 1371 0.426 METKRIPMDMVIDCVSGAHFSGWQPSTTSSSSPTSSHQPFIIGVAGGTASGKTTVCDIIIQQLQDHRVVLVCQDSFYRGLTNDELKRVHEYNFDHPNAFDTEQLVETLGQLKSGQSVQIPIYDFKLHQRSTDRSRQVNGSDVIIMEGILVFHEQRVRNMMNMKIFVDADPDVRLARRIKRDTVERGRDIQSYAKFVKPAYEDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQTRGMHTLIRDRDISKHDFIFYSDRLIRLVVEHGLGYLPFTEKPVITPTGSIYTGVDFCKKLCGVSIIRSGESMENAFRACCKGIKIGKILIHRDGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASEAVELLIKKGVPESQIIFLNLISAPEGIQCVCKRFPHMKIVTSEIEEGLNDQLQVIPGLGQFGDRYFGTDDS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1493 456 Pfam Uracil phosphoribosyltransferase 253 453 - -
Vra7g1493 456 PRINTS Uridine kinase signature 39 56 - -
Vra7g1493 456 PRINTS Uridine kinase signature 69 80 - -
Vra7g1493 456 PRINTS Uridine kinase signature 114 129 - -
Vra7g1493 456 PRINTS Uridine kinase signature 171 181 - -
Vra7g1493 456 PRINTS Uridine kinase signature 185 196 - -
Vra7g1493 456 CDD UMPK 41 235 IPR000764 -
Vra7g1493 456 SUPERFAMILY PRTase-like 238 454 IPR029057 -
Vra7g1493 456 CDD PRTases_typeI 312 413 IPR000836 -
Vra7g1493 456 TIGRFAM udk: uridine kinase 38 235 IPR000764 -
Vra7g1493 456 Pfam Phosphoribulokinase / Uridine kinase family 41 223 IPR006083 GO:0005524|GO:0016301
Vra7g1493 456 PANTHER URIDINE KINASE 21 452 - -
Vra7g1493 456 ProSiteProfiles UvrC family, homology region profile. 127 224 IPR001162 GO:0009381
Vra7g1493 456 PANTHER URIDINE KINASE 21 452 - -
Vra7g1493 456 Gene3D - 239 453 IPR029057 -
Vra7g1493 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 228 IPR027417 -
Vra7g1493 456 Gene3D - 35 238 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1493 Vra-Chr7 32247263 32252523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1493 1 455 PRT Gene Family AT3G27190 71.636 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1493 K00876 - gmx:100816209 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1493 7 32247263 32252523 Vra7g1493 7 32247263 32252523 ECH