Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1491 ATGGTTTCGACGAGACGGAGTGGATCTCTCTCTGCCAACAACTCCAAACGATCTTCCTCATCGGAAAATAAACCTCCTTCGCCGAAGCGTCAGAAGGTCGACAATGGTGGTTCGTCGGAGAAACCGGTGCCGACACCGGCGGAGAATTCGAAGGATTTACGTACTTCGGAGCCCCTGCCTGATCCTGGGGAATGTGGCTCTGCCGAAGTTCAGATCGCCGGAGCGGGTTCCGCCGATGGAGTGAGCTCCGGCAAGGTCGACGCTACGCCGGCTGTGCCTGTCACGGCACCGATTGCTGATGCCGCATGTCCGTCCTTCTCTTCGTGGAGTGTGTATCCGAAACAGATTCCGAATATCGAGGGAGGACCGTGGTGCAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACTATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAGGATCAGACTATAAGTGGAAATTTATGCAAGATCAAGTACACGCAGCGCGATGGAAGTGTTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGAACGCATGTCAAGAAGAATACCAGCTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTCCAGCAACTTAATACTGAGGTTGCAATTAGGGGTGCGGAAGTTCCAAGTGGTGTTGGGAAATATCTGCAGCTTGAAAGGAAAAGTGGAGACCCTTCAGCTGTGGCCGGGGCCTCTATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCGTACCTCTAGTAAACCTCACCTGGGTACTGATGTCTCTAGTCATCCTATTCATGATAGTACAGAAATTGAGCTTGATGCCTCAGAGTCTAATCCAAATGTGCATACTGATAAAGCAGAAGATGCTCCAACAAATGAGAAGAATTCAACGATGGATTGCAATCCGGATGCTGGTGCAGAGGCAGGCAATGTAAAACTCTCTGGGGTTAATGATTTCCTAAGGCCTTTCTTCAGGATCTTAGCTCGACCTAGTTGTAAACTGAAATTGAGCAAAAGTATATGTAAACAGGTATTGGAAGAAAAAAATGGGACGCTGGACATGCAGGCTGCATCAACTTTGGGTACATCTGTACGCTCTGCTGTGTTTAAAGAAGATGTTCATGCTGCTATATTGGATGGGAAAGAAATAGATGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTCTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAACATGAAAAGTTTACTACAGATCTTACAACCATAAACCCTCGTATTCTGCTCTCAGGGCCTGCAGGGTCAGAAATATATCAAGAGATGTTGGCAAAGGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGTCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGATACTCAAAGATGGATTAAATGCTGAAAAATCTTTTATCAGCACTAAGCAAAGTCCTACAGCAACAAAAATGGCTGGGAGCGTGGATCCACCTGCTACTGAAACAGAGACACCTAGCTCTTCAAATGCACCTTCACTGGCCTTTGACTCTCAACCTAAGTTGGAAACTGATAACATGCCATCCACCTCTGGGACAGCCAAAAGTTGCTTGTTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGGGTGTATCAAACATCTTCAAGGGGGCCATCTAATGGAGGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGTGGTGCCTGTGAGGGAGGTCAAGGTTTTTTCTGCAATGTCACTGATCTTCGCTTGGAAAGTAGCGCTGTAGAAGAACTGGACAAATTACTTATTCATTCACTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAATGCACCATTCATATTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATTCATATGCATTTAAAAGTAAGCTTGAAAATCTTCCAAACAATGTGGTCGTAATAGGTTCTCACACTCAAAATGACAGTCGTAAGGAAAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTTGACCTGGCTTTCCCTGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAGGTTCCAAAACCAAATAGAACTTTGACTAAGCTCTTCCCAAATAAAATTATAATTCACATGCCTCAGGACGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAAACTCTCAAAATCAAAGGGAATTTACATCACTTGCGTGCAGTTTTGGGACGATGTGGAATGGAATGCGAAGGACTTGAGACCTTATGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGTCATCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCGAAGCTTGTATTGTCATGTGAGAGCATTCAGTATGGAATTGGGATCTTGCAGTCCGTCCAGAATGAGTCCAAGAGCCTGAAGAAATCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGACGTTATTCCTCCTAGTGACATTGATGTTACCTTTGATGATATTGGAGCTCTTGAAAAGGTCAAGGATACATTGAAAGAGTTGGTGATGCTTCCTTTACAGCGACCTGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCATGCAAAGGTATCCTATTATTTGGTCCTCCTGGGACGGGTAAAACAATGCTCGCAAAAGCAATTGCTACTGAAGCTGGTGCAAACTTCATTAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTTTGGCGAGTAAAATTTCTCCAAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTAAATTGGGATGGCTTACGTACGAAGGAAACAGAGAGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTATAAGGAGAATGCCAAGAAGATTGATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAAATATTGAAAGTCATACTGGCCAAAGAGGAACTGTCTCCTGATGTTGATTTGGATGCAGTTGCTACTATGACCGATGGATATTCTGGAAGTGATCTTAAGAATTTATGTGTTACGGCGGCACATCGGCCTATTAAAGAGATATTAGAAAAAGAAAAAAAGGACCGCGTTGCTGCACTAGCAGAAGGTCAACCAGCTCCAGCGTTATGTAGCAGTGGGGACATCAGATCATTAAACATGGAGGACTTCAAATATGCTCATCAACAGGTATGTGCAAGTGTTTCTTCTGAATCAGTAAACATGACTGAGCTTTTACAATGGAATGAACTGTATGGAGAAGGGGGTTCAAGAGTAAAGAAAGCACTCAGCTATTTCATGTGA 3681 0.43 MVSTRRSGSLSANNSKRSSSSENKPPSPKRQKVDNGGSSEKPVPTPAENSKDLRTSEPLPDPGECGSAEVQIAGAGSADGVSSGKVDATPAVPVTAPIADAACPSFSSWSVYPKQIPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTISGNLCKIKYTQRDGSVVAVLESTGSKGSVLVNGTHVKKNTSCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEVPSGVGKYLQLERKSGDPSAVAGASILASLSIKQDLTRWKSPTRTSSKPHLGTDVSSHPIHDSTEIELDASESNPNVHTDKAEDAPTNEKNSTMDCNPDAGAEAGNVKLSGVNDFLRPFFRILARPSCKLKLSKSICKQVLEEKNGTLDMQAASTLGTSVRSAVFKEDVHAAILDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTTDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAEILKDGLNAEKSFISTKQSPTATKMAGSVDPPATETETPSSSNAPSLAFDSQPKLETDNMPSTSGTAKSCLFKLGDRVKFSCSSSCGVYQTSSRGPSNGGRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRNAPFILFMKDAEKSIVGNGDSYAFKSKLENLPNNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKIIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRAVLGRCGMECEGLETLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLVLSCESIQYGIGILQSVQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLDAVATMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKDRVAALAEGQPAPALCSSGDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFM* 1227
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1491 1226 SUPERFAMILY SMAD/FHA domain 111 224 IPR008984 GO:0005515
Vra7g1491 1226 Coils Coil 882 902 - -
Vra7g1491 1226 Pfam FHA domain 145 214 IPR000253 GO:0005515
Vra7g1491 1226 CDD AAA 960 1093 - -
Vra7g1491 1226 Pfam AAA+ lid domain 1115 1150 IPR041569 -
Vra7g1491 1226 Gene3D - 920 1201 IPR027417 -
Vra7g1491 1226 MobiDBLite consensus disorder prediction 274 295 - -
Vra7g1491 1226 MobiDBLite consensus disorder prediction 523 570 - -
Vra7g1491 1226 ProSitePatterns AAA-protein family signature. 1065 1084 IPR003960 GO:0005524|GO:0016887
Vra7g1491 1226 ProSiteProfiles Forkhead-associated (FHA) domain profile. 144 197 IPR000253 GO:0005515
Vra7g1491 1226 CDD FHA 144 224 IPR000253 GO:0005515
Vra7g1491 1226 MobiDBLite consensus disorder prediction 538 570 - -
Vra7g1491 1226 MobiDBLite consensus disorder prediction 1 68 - -
Vra7g1491 1226 Gene3D - 123 231 - -
Vra7g1491 1226 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 376 1226 - -
Vra7g1491 1226 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 78 350 - -
Vra7g1491 1226 MobiDBLite consensus disorder prediction 1 26 - -
Vra7g1491 1226 Gene3D - 1094 1188 - -
Vra7g1491 1226 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 78 350 - -
Vra7g1491 1226 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 376 1226 - -
Vra7g1491 1226 MobiDBLite consensus disorder prediction 274 328 - -
Vra7g1491 1226 MobiDBLite consensus disorder prediction 296 324 - -
Vra7g1491 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 920 1200 IPR027417 -
Vra7g1491 1226 SMART AAA_5 958 1095 IPR003593 -
Vra7g1491 1226 Pfam ATPase family associated with various cellular activities (AAA) 962 1091 IPR003959 GO:0005524|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra7g1491 Vra-Chr7 32225461 32236456 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1491 921 1169 Calmodulin-binding Proteins AT3G56690 39.062 8.33e-41 162
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1491 - - gmx:100816731 2165.96
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1491 7 32225461 32236456 Vra7g1491 7 32225461 32236456 ECH