Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g1491 | ATGGTTTCGACGAGACGGAGTGGATCTCTCTCTGCCAACAACTCCAAACGATCTTCCTCATCGGAAAATAAACCTCCTTCGCCGAAGCGTCAGAAGGTCGACAATGGTGGTTCGTCGGAGAAACCGGTGCCGACACCGGCGGAGAATTCGAAGGATTTACGTACTTCGGAGCCCCTGCCTGATCCTGGGGAATGTGGCTCTGCCGAAGTTCAGATCGCCGGAGCGGGTTCCGCCGATGGAGTGAGCTCCGGCAAGGTCGACGCTACGCCGGCTGTGCCTGTCACGGCACCGATTGCTGATGCCGCATGTCCGTCCTTCTCTTCGTGGAGTGTGTATCCGAAACAGATTCCGAATATCGAGGGAGGACCGTGGTGCAGGTTCTTGTCTCAGTCTGCACAGAATCCTAATGTTGCTGTTTGCATACCCAATTTCACTATTGGTTCTAATAGAAGTTGCAACTTTGCACTGAAGGATCAGACTATAAGTGGAAATTTATGCAAGATCAAGTACACGCAGCGCGATGGAAGTGTTGTAGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTAAATGGAACGCATGTCAAGAAGAATACCAGCTGTGTGCTTAACTCGGGTGATGAAGTGGTTTTTGGTGTTCTTGGAAATCATTCTTATATTTTCCAGCAACTTAATACTGAGGTTGCAATTAGGGGTGCGGAAGTTCCAAGTGGTGTTGGGAAATATCTGCAGCTTGAAAGGAAAAGTGGAGACCCTTCAGCTGTGGCCGGGGCCTCTATTTTGGCTTCTCTTTCCATCAAACAGGACCTTACAAGATGGAAATCTCCAACTCGTACCTCTAGTAAACCTCACCTGGGTACTGATGTCTCTAGTCATCCTATTCATGATAGTACAGAAATTGAGCTTGATGCCTCAGAGTCTAATCCAAATGTGCATACTGATAAAGCAGAAGATGCTCCAACAAATGAGAAGAATTCAACGATGGATTGCAATCCGGATGCTGGTGCAGAGGCAGGCAATGTAAAACTCTCTGGGGTTAATGATTTCCTAAGGCCTTTCTTCAGGATCTTAGCTCGACCTAGTTGTAAACTGAAATTGAGCAAAAGTATATGTAAACAGGTATTGGAAGAAAAAAATGGGACGCTGGACATGCAGGCTGCATCAACTTTGGGTACATCTGTACGCTCTGCTGTGTTTAAAGAAGATGTTCATGCTGCTATATTGGATGGGAAAGAAATAGATGTTTCTTTTGACAACTTCCCTTACTATTTAAGTGAGAGCACAAAAAATGTCTTGGTGGCTGCTTGCTTTATGCACCTAAGGCATAAAGAACATGAAAAGTTTACTACAGATCTTACAACCATAAACCCTCGTATTCTGCTCTCAGGGCCTGCAGGGTCAGAAATATATCAAGAGATGTTGGCAAAGGCACTTGCAAAATACTTTGGAGCTAAGCTGCTCATATTTGATAGTCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGATACTCAAAGATGGATTAAATGCTGAAAAATCTTTTATCAGCACTAAGCAAAGTCCTACAGCAACAAAAATGGCTGGGAGCGTGGATCCACCTGCTACTGAAACAGAGACACCTAGCTCTTCAAATGCACCTTCACTGGCCTTTGACTCTCAACCTAAGTTGGAAACTGATAACATGCCATCCACCTCTGGGACAGCCAAAAGTTGCTTGTTCAAATTAGGTGATAGGGTGAAATTTAGCTGTTCATCTTCTTGTGGGGTGTATCAAACATCTTCAAGGGGGCCATCTAATGGAGGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCCTTGTCTAAAATTGGTGTGAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGTGGTGCCTGTGAGGGAGGTCAAGGTTTTTTCTGCAATGTCACTGATCTTCGCTTGGAAAGTAGCGCTGTAGAAGAACTGGACAAATTACTTATTCATTCACTGTTTGAGGTTGTTTTTAGTGAGAGTAGAAATGCACCATTCATATTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATTCATATGCATTTAAAAGTAAGCTTGAAAATCTTCCAAACAATGTGGTCGTAATAGGTTCTCACACTCAAAATGACAGTCGTAAGGAAAAGTCACATCCTGGTGGTTTGCTTTTTACAAAATTTGGTAGCAATCAGACTGCCCTTCTTGACCTGGCTTTCCCTGATAGTTTTGGACGATTGCATGACAGAGGGAAGGAGGTTCCAAAACCAAATAGAACTTTGACTAAGCTCTTCCCAAATAAAATTATAATTCACATGCCTCAGGACGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAAACTCTCAAAATCAAAGGGAATTTACATCACTTGCGTGCAGTTTTGGGACGATGTGGAATGGAATGCGAAGGACTTGAGACCTTATGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAGAAGATAATTGGTTGGGCTTTAAGTCATCACCTCATGCAGAATTCAGAAGCTAAGCCTGATTCGAAGCTTGTATTGTCATGTGAGAGCATTCAGTATGGAATTGGGATCTTGCAGTCCGTCCAGAATGAGTCCAAGAGCCTGAAGAAATCTCTTAAGGATGTTGTAACAGAAAATGAATTTGAAAAGAGGCTTTTGGCTGACGTTATTCCTCCTAGTGACATTGATGTTACCTTTGATGATATTGGAGCTCTTGAAAAGGTCAAGGATACATTGAAAGAGTTGGTGATGCTTCCTTTACAGCGACCTGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCATGCAAAGGTATCCTATTATTTGGTCCTCCTGGGACGGGTAAAACAATGCTCGCAAAAGCAATTGCTACTGAAGCTGGTGCAAACTTCATTAACATTTCTATGTCAAGTATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATATGTGAAAGCTGTTTTCTCTTTGGCGAGTAAAATTTCTCCAAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGTCGGAGGGAAAACCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTAAATTGGGATGGCTTACGTACGAAGGAAACAGAGAGAGTTCTTGTGCTGGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTATAAGGAGAATGCCAAGAAGATTGATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAAATATTGAAAGTCATACTGGCCAAAGAGGAACTGTCTCCTGATGTTGATTTGGATGCAGTTGCTACTATGACCGATGGATATTCTGGAAGTGATCTTAAGAATTTATGTGTTACGGCGGCACATCGGCCTATTAAAGAGATATTAGAAAAAGAAAAAAAGGACCGCGTTGCTGCACTAGCAGAAGGTCAACCAGCTCCAGCGTTATGTAGCAGTGGGGACATCAGATCATTAAACATGGAGGACTTCAAATATGCTCATCAACAGGTATGTGCAAGTGTTTCTTCTGAATCAGTAAACATGACTGAGCTTTTACAATGGAATGAACTGTATGGAGAAGGGGGTTCAAGAGTAAAGAAAGCACTCAGCTATTTCATGTGA | 3681 | 0.43 | MVSTRRSGSLSANNSKRSSSSENKPPSPKRQKVDNGGSSEKPVPTPAENSKDLRTSEPLPDPGECGSAEVQIAGAGSADGVSSGKVDATPAVPVTAPIADAACPSFSSWSVYPKQIPNIEGGPWCRFLSQSAQNPNVAVCIPNFTIGSNRSCNFALKDQTISGNLCKIKYTQRDGSVVAVLESTGSKGSVLVNGTHVKKNTSCVLNSGDEVVFGVLGNHSYIFQQLNTEVAIRGAEVPSGVGKYLQLERKSGDPSAVAGASILASLSIKQDLTRWKSPTRTSSKPHLGTDVSSHPIHDSTEIELDASESNPNVHTDKAEDAPTNEKNSTMDCNPDAGAEAGNVKLSGVNDFLRPFFRILARPSCKLKLSKSICKQVLEEKNGTLDMQAASTLGTSVRSAVFKEDVHAAILDGKEIDVSFDNFPYYLSESTKNVLVAACFMHLRHKEHEKFTTDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAEILKDGLNAEKSFISTKQSPTATKMAGSVDPPATETETPSSSNAPSLAFDSQPKLETDNMPSTSGTAKSCLFKLGDRVKFSCSSSCGVYQTSSRGPSNGGRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVTDLRLESSAVEELDKLLIHSLFEVVFSESRNAPFILFMKDAEKSIVGNGDSYAFKSKLENLPNNVVVIGSHTQNDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNRTLTKLFPNKIIIHMPQDEALLASWKQQLDRDVETLKIKGNLHHLRAVLGRCGMECEGLETLCIKDQTLTNENAEKIIGWALSHHLMQNSEAKPDSKLVLSCESIQYGIGILQSVQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALEKVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKISPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERVLVLAATNRPFDLDEAVIRRMPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLDAVATMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKDRVAALAEGQPAPALCSSGDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFM* | 1227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g1491 | 1226 | SUPERFAMILY | SMAD/FHA domain | 111 | 224 | IPR008984 | GO:0005515 | |
Vra7g1491 | 1226 | Coils | Coil | 882 | 902 | - | - | |
Vra7g1491 | 1226 | Pfam | FHA domain | 145 | 214 | IPR000253 | GO:0005515 | |
Vra7g1491 | 1226 | CDD | AAA | 960 | 1093 | - | - | |
Vra7g1491 | 1226 | Pfam | AAA+ lid domain | 1115 | 1150 | IPR041569 | - | |
Vra7g1491 | 1226 | Gene3D | - | 920 | 1201 | IPR027417 | - | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 274 | 295 | - | - | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 523 | 570 | - | - | |
Vra7g1491 | 1226 | ProSitePatterns | AAA-protein family signature. | 1065 | 1084 | IPR003960 | GO:0005524|GO:0016887 | |
Vra7g1491 | 1226 | ProSiteProfiles | Forkhead-associated (FHA) domain profile. | 144 | 197 | IPR000253 | GO:0005515 | |
Vra7g1491 | 1226 | CDD | FHA | 144 | 224 | IPR000253 | GO:0005515 | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 538 | 570 | - | - | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Vra7g1491 | 1226 | Gene3D | - | 123 | 231 | - | - | |
Vra7g1491 | 1226 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 376 | 1226 | - | - | |
Vra7g1491 | 1226 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 78 | 350 | - | - | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Vra7g1491 | 1226 | Gene3D | - | 1094 | 1188 | - | - | |
Vra7g1491 | 1226 | PANTHER | ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 | 78 | 350 | - | - | |
Vra7g1491 | 1226 | PANTHER | ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 | 376 | 1226 | - | - | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 274 | 328 | - | - | |
Vra7g1491 | 1226 | MobiDBLite | consensus disorder prediction | 296 | 324 | - | - | |
Vra7g1491 | 1226 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 920 | 1200 | IPR027417 | - | |
Vra7g1491 | 1226 | SMART | AAA_5 | 958 | 1095 | IPR003593 | - | |
Vra7g1491 | 1226 | Pfam | ATPase family associated with various cellular activities (AAA) | 962 | 1091 | IPR003959 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g1491 | Vra-Chr7 | 32225461 | 32236456 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g1491 | 921 | 1169 | Calmodulin-binding Proteins | AT3G56690 | 39.062 | 8.33e-41 | 162 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g1491 | - | - | gmx:100816731 | 2165.96 |