Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1487 ATGGCCACCACCACCAGTCTTGGCGGCGGCGCTGGCGGAGATGACCGCGTCCTAGCCACGGCTCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGATAACCGACTATCCGGCATCTCCGACCTAATAAACGGTGACGATTCTAAATCCTCTGAAGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCCGACGCATCCCTCTCCGACGAGCCTTCGCGCCAATCCACTTCTCTCTTCAACCCTCCTAACAATCCCGCGGAGTACTTTTCCGCGGTTGATGAGATCATCCACTGGATGGAGCAGTTTTCGATCGCGCCACCGTCCTCCGCCGTGGGGCGCACAGGGCCCGCCATCGTGGACCGGGCGGAGAACGCGATTCAGCTCGCGATGTCTCGACTGGAGGACGAGATGCGGCACGTGCTGATTTGCAACACGATCCCGCTCGACGCCGTGAGCCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCGGCTCGCACGACGGCGCCATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGTCGCTTCCATGAGAGAGGCGCGAGTCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAAGCGGTTCAGGATCTCAGGCAAATTATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCTCTGGATGAATGTTTAGTCATTCTGGGTGTTGAGCGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGAAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGTCGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGACTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTATTATGCAGTTACTGAATTTCGGCGAGGCTATTTCGATTTGTAAGCGCTCGCCGGAGAAGCTGTTTCGGATTTTGGACATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCTATGGTTTCGGACGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGACTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGAATGAAACTTCCAAAAAACCAGTCATAACTGGGGATGTTCACCCTTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGATTAGCGAGGAGGATCTCCATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAGGCCATGTCGCCCTTGGGGCAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTTGAGGAGAAGTCCAGGCTTTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAACCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATACGGCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCGTCGAAGATGGCTTTGAAGGAGAGGTTCAAAAGCTTCAATGCCTGCTTTGAAGAAATTTATAGGGTCCAGACTGCTTGGAAGGTCCCGGACGATCAGCTTCGGGAGGAGCTGAGGATATCTATATCGGAGAAGGTGATTCCTGCATATCGCTCTTTTGTGGGTAGGTTTAGGAGTCAGTTAGAGGGAAGGCATGCGGGGAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGAAGGAAAAGTACATAG 1989 0.5103 MATTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSDEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQFSIAPPSSAVGRTGPAIVDRAENAIQLAMSRLEDEMRHVLICNTIPLDAVSRYGSIRRVSLSFGSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLRQIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRVEWRSLDEKMKNWVQAVKVVVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCIMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLEISEEDLHRFKNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1487 662 Gene3D Exocyst complex component Exo70 90 654 - -
Vra7g1487 662 SUPERFAMILY Cullin repeat-like 91 648 IPR016159 -
Vra7g1487 662 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 57 661 - -
Vra7g1487 662 Pfam Exo70 exocyst complex subunit 286 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra7g1487 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 661 IPR004140 GO:0000145|GO:0006887
Vra7g1487 662 Coils Coil 661 662 - -
Vra7g1487 662 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1487 Vra-Chr7 32194726 32197221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1487 15 661 EXO70 exocyst subunit family AT5G50380 59.882 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1487 K07195 - gmx:100818693 1198.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1487 7 32194726 32197221 Vra7g1487 7 32194726 32197221 ECH