Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1484 ATGGCACGACCCATTTCTCATGTCTTATTTTCACTTGTTCTTTGCATTCTGCTGCAAGATCATATCCAAGCACTCAGACAGTCGTATATTGTATACTTAGGATCACATTCTTTTGGTCCAAATCCTTCTTTGGTTGATCTTGAATCTGTCACAGACTCTCACCATGATTTTCTTGGATCTTACGTGGGAAGCATAGAAAAGGCCAAGGAAGCAATCTTTTATTCTTATAATAGATATATCAATGGGTTTGCTGCAGTACTTGAGGAAGATGAAGCAGCAAATATTGCAAAGCATCCCAGTGTCATATCAGTTTTCTTAAACAAAAGGCATAAATTGCACACAACACACTCCTGGAACTTCCTTGGATTAGAAAGAAATGGTGCTTTTCCACCTCAGTCATTATGGGGGAAGACTAAGGGTGAAGATGTCATTATTGGAAATATCGATACAGGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCCATCCCAAAAAGATGGCGTGGAATCTGTCAAACGGAAGATAATCTTAAATGCAACAGGAAGCTTATTGGAGCAAGATACTTCTACAAAGGCTATGAGTCAAGTATTGGTAAAAAACTGAATATGTCGATGGTTAGTGCACGCGACTACGGAGGTCATGGTTCACATACTTTATCAACAGCTGGTGGTAACGCTGTTCCTGGAGCTAATGTTTTTGGGTTTGGCAATGGAACTGCAAGTGGTGGATCACCAAAAGCTCGAGTTGCAGCCTACAAGGCGTGCTGGCCTCCGGGATGTACTGATGCAGATATTGTTGCTGCTTTTGAGGCTGCCATAAGTGATGGTGTGGATGTGATTACCATGTCTGTGGGTTCAGAAAATCCACCTGAGTTTTTTGAAAGTGGTATATCTATAGGGTCCTTCCATGCAGTTTCCCACGGCATAACATTCGTGGCTTCTGGAGGAAATGCAGGACCTATTCAAGGATCTGTGTCCAACAATGAACCGTGGACTCTCACAGTTGGAGCAAGCACAATCGACAGGGACTTCATTAGTAATGTTATACTTGGTAACCGGAAAATCTTCGAGGGAGCTAGCCTTTCAAGATCTGGCTTACCATCTAACAAGAAGTACCCATTGATCACCTCTGAACAAGCACTAACTACATCGGAATCATCTTCTGTTAACGCCTTTTTTTGCACGAATGGCACTCTTGATGCTAGGAAGGTGAAGGGTAAGATATTGGTGTGTCTTCGCGGCGTAAATGGTAGAGTAGAGAAGGGTGCTGTAGCTGCTAGTTTAGGAGCTGTTGGAATGATTCTGGCTAATCGTGGGGCCTTAGATGATGAAATTATATCCGATCCCCATGTGCTTCCTGCTACACATGTAAACTTTGAGACTGGCAAATACATTTTTAGTTACATCAACCGTACCAAGTCTCCCGTGGCTTATATTTCTAGAGTGAGAACAAAACTGGGTACGAAGCCAGCTCCAGTTATGGCTGCATTTTCATCAAGGGGTCCCAATCTCCTCGACCCAGCAATCCTCAAGCCTGATATCACTGCACCAGGAGTCAATATCATTGCTGCTTATACTGAAGCCTTAGATCCCACAAAACCTGACCAAACAATAACTCCTTACACTGCATTGTCTGGCACCTCAATGTCGTGTCCTCATGTTGCTGGTGTTGTTGGGTTGCTCAAAGCCCTCCATCCTAATTGGAGCCCAGCTGCTATTAAGTCAGCAATCATTACCTCAGCAACTACAAAAGATAACTCTGGAAGGCGTATCCGAGCTTCACCATTGAAGGAGTCAACACCATATGACTTAGGTGCAGGCCACATTCGACCTAATCGTGCTGCATACCCTGGACTTATATATGACCTAAATACTACTGATTATTTAAACTATTTGTGTGGTCGTGGCTACGACAGTTCTCGGCTTATGTTGTTCTACGGCAAGCCTTTCACTTGTCCGAAGTCCTTCAGTTTAGCAGATTTCAATTACCCAACAATCACGATTCCTCGGATTGAGTATGGACAATCTGTGACTGTTTCTCGAACAGTTACAAATGTTGGGTCCCCAAGCGTGTATAGAGTTCGCATTGAGGCGCCACCAAATGTTACAGTTTCTGTTGATCCAGCGAAACTGAAATTCAAGGAAAAGGGTGAGAAAAAAGAGTTTCGAGTTTCATTGACCTTGAAGTCCAAAACTGAGAACACCACTGATTTCGTATATGAGTATGGGTCGTTGACATGGACTAATCACAAGAACCGCGTTAGGAGTCCAATTGTAGTTAACTTGAATAGTTTCTGA 2310 0.4316 MARPISHVLFSLVLCILLQDHIQALRQSYIVYLGSHSFGPNPSLVDLESVTDSHHDFLGSYVGSIEKAKEAIFYSYNRYINGFAAVLEEDEAANIAKHPSVISVFLNKRHKLHTTHSWNFLGLERNGAFPPQSLWGKTKGEDVIIGNIDTGVWPESKSFSDEGFGPIPKRWRGICQTEDNLKCNRKLIGARYFYKGYESSIGKKLNMSMVSARDYGGHGSHTLSTAGGNAVPGANVFGFGNGTASGGSPKARVAAYKACWPPGCTDADIVAAFEAAISDGVDVITMSVGSENPPEFFESGISIGSFHAVSHGITFVASGGNAGPIQGSVSNNEPWTLTVGASTIDRDFISNVILGNRKIFEGASLSRSGLPSNKKYPLITSEQALTTSESSSVNAFFCTNGTLDARKVKGKILVCLRGVNGRVEKGAVAASLGAVGMILANRGALDDEIISDPHVLPATHVNFETGKYIFSYINRTKSPVAYISRVRTKLGTKPAPVMAAFSSRGPNLLDPAILKPDITAPGVNIIAAYTEALDPTKPDQTITPYTALSGTSMSCPHVAGVVGLLKALHPNWSPAAIKSAIITSATTKDNSGRRIRASPLKESTPYDLGAGHIRPNRAAYPGLIYDLNTTDYLNYLCGRGYDSSRLMLFYGKPFTCPKSFSLADFNYPTITIPRIEYGQSVTVSRTVTNVGSPSVYRVRIEAPPNVTVSVDPAKLKFKEKGEKKEFRVSLTLKSKTENTTDFVYEYGSLTWTNHKNRVRSPIVVNLNSF* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1484 769 Pfam PA domain 397 468 IPR003137 -
Vra7g1484 769 ProSiteProfiles Serine proteases, subtilase domain profile. 117 619 - -
Vra7g1484 769 SUPERFAMILY Subtilisin-like 112 622 IPR036852 GO:0004252|GO:0006508
Vra7g1484 769 Gene3D Peptidase S8/S53 domain 142 632 IPR036852 GO:0004252|GO:0006508
Vra7g1484 769 Pfam Subtilase family 140 588 IPR000209 GO:0006508|GO:0008236
Vra7g1484 769 SUPERFAMILY PA domain 396 476 IPR046450 -
Vra7g1484 769 CDD PA_subtilisin_like 351 483 - -
Vra7g1484 769 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vra7g1484 769 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vra7g1484 769 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Vra7g1484 769 CDD Peptidases_S8_3 110 586 IPR034197 -
Vra7g1484 769 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Vra7g1484 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Vra7g1484 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Vra7g1484 769 Gene3D - 345 490 - -
Vra7g1484 769 Pfam Fibronectin type-III domain 664 764 IPR041469 -
Vra7g1484 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.3 24 764 - -
Vra7g1484 769 Gene3D - 636 767 - -
Vra7g1484 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 764 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1484 Vra-Chr7 32167207 32170774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1484 24 768 Subtilisin-like Serine Gene Family AT5G59810 56.175 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1484 - - vun:114175516 1352.42