Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1475 ATGGGCAAGGCGTCAAAGTGGTTTCGCGGCCTTCTCGGTCTCAAAAAAACAGACCATAGCTCCTCACCCGCCAAGCCACCCAAAGAGAAACGCCGATGGAGCTTCGTTAAATCAAACACAGAAAAGGACAACAACGCTGCTGCCACCTGTCCACCACAAGGAAACGACGGCGGTAAGCACGCCATGGCAGTCGCAGCAGCCACTGCTGCAGTGGCGGAAGCGGCCGTGGCTGCCGCCGAAGCTGCCGCCGTTGTTGTCAGACTAACGAGCAGCAGTGGCAGATGCGCCGACGCAGGACCCACAAGGATTCGCCAACACTGGGCCGCCGTTAAGATCCAAGCGGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTGAGAGCATTAAAAGGGTTGGTAAAACTTCAAGCATTAGTGAGAGGTCACATTGAGAGGAAGCGTACAGCGCAGTGGCTGAAAAGAGTGCAAGCACTCTTGCATACACAGGCACAAGTTTCTGCAGGGTTGGCTCTGCATGCCTCACCTTCAAGTGCAAAGTTATCTAGCCACTTCCATGGTCCAGAAACACCAGAAAAATTTGAAAGCCCCATCAGCTCTAAGAGCATGAAATATGAGCAATCACCTATATTCAAGAGAAATGGCTCCAAATCCTGTGTGCAGATCAATGGCTATCAAGAGATATGTGGTAGTAGATTGGAGAATCAAGTAACTGAACAACCATGGAGCTCGGGAAGATCATTGATAAGAACATATAGTTCCAATGATGAAAGAAATGACAGGGTTCTTGAAGTTGATTCTGGAAAACCACACTTTACAAAGCGTAGAAACCTCTCTTACTCCACAGTTTCTGATCATTATAGCAAGAGTTTGAACAGCACAAAGGAGTCAACATCTCTTCAATCTGGTCAAAGTCCATGTGGTGAAGTTCAGTCCTACAGTTACAGCTCACAAAAAGTGAACGAGATTGAGGAGAGTCCATTCTGCACTGCTGACAACAGTCCACAATTCTTATCAGCCACTTCCAAAGATGATGGCTTCAAAAGAAGCCCTTTTACTCCCACAAGGAGTGATGGCTCTAGAAGCTACATTCGTGGTTATGCTGACTACCCAAGTTACATGGCATGCACTGAGTCTTCAAAAGCAAAGGTCAGATCTTTGAGTGCCCCAAAACAAAGGCCAAATTGTGAGAGACCTGGTTCATCAAATAGATACTCTCTTAATGGATTTGACATGTCAAGATTGGCCACACAAAGGGCAATGCATGCAAGCTTCACCAATAAGGCATATCCAGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGTGGGGTACAGATACTGA 1338 0.4746 MGKASKWFRGLLGLKKTDHSSSPAKPPKEKRRWSFVKSNTEKDNNAAATCPPQGNDGGKHAMAVAAATAAVAEAAVAAAEAAAVVVRLTSSSGRCADAGPTRIRQHWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQWLKRVQALLHTQAQVSAGLALHASPSSAKLSSHFHGPETPEKFESPISSKSMKYEQSPIFKRNGSKSCVQINGYQEICGSRLENQVTEQPWSSGRSLIRTYSSNDERNDRVLEVDSGKPHFTKRRNLSYSTVSDHYSKSLNSTKESTSLQSGQSPCGEVQSYSYSSQKVNEIEESPFCTADNSPQFLSATSKDDGFKRSPFTPTRSDGSRSYIRGYADYPSYMACTESSKAKVRSLSAPKQRPNCERPGSSNRYSLNGFDMSRLATQRAMHASFTNKAYPGSGRLDKLGMPVGYRY* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1475 445 Gene3D - 103 157 - -
Vra7g1475 445 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Vra7g1475 445 Pfam IQ calmodulin-binding motif 106 126 IPR000048 GO:0005515
Vra7g1475 445 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Vra7g1475 445 MobiDBLite consensus disorder prediction 287 306 - -
Vra7g1475 445 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Vra7g1475 445 SMART iq_5 104 126 IPR000048 GO:0005515
Vra7g1475 445 SMART iq_5 127 148 IPR000048 GO:0005515
Vra7g1475 445 MobiDBLite consensus disorder prediction 1 33 - -
Vra7g1475 445 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 440 - -
Vra7g1475 445 Pfam Protein of unknown function (DUF4005) 332 406 IPR025064 -
Vra7g1475 445 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Vra7g1475 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 153 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1475 Vra-Chr7 32079698 32083058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1475 1 445 IQD Protein Family AT4G23060 42.015 2.67e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1475 - - gmx:100793587 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1475 7 32079698 32083058 Vra11g0304 11 2144425 2147252 PCT