Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1472 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGCCACAGATTGAGGAGCGAAGCACCAGCACCGTTTCAAGCCTGCCATTTTCCGCGACCTTCCATGAGCACGCAGAGGTTGGATTTGCCATGTTCTACCTTCACACGCAAAGACAGCTCTTCACGCTCGCAGCCCCTCAGGCCAGTGGGGCTCTCGGTGGAGAAACCCATAGAAGCCAAGACCAGCACATGTTCTCTCAAGCACAACATTCGACTCCCACCTTTGGCCATCACAGCGGCAACACCATTGGTGGAAGAGTCCATCAAGGACAAGAGTTTGAAAAGGCTCGCGGAGCACGATGAGTCCTTCACCAACGTACCCAAGAGGAAAAAGGGTATCACGGAGCGTGACAATTCCGGTGATAACTTCTGGTTTCAGCCTGGCGTTGAGGGTAACACTTTAGGAGGGCTCAACAACACTTCACTTGCTTTCTCCCCGGAGGAAGAGACGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTTCCCTTAAACCCGTGGCTGGAATCATGTGTAACAAAGATTACCAACTTCGGTGAGGGTAGCCACCGTCCTCGCCAGCATCACAACGACCATGCAACTGAAGGGTCGGTCTCCAACGCTTCTTCTGAGAGCCAAAGCCTGAGGCTAAACGAGAACGCGTCAGAACATGAAGTGGGAAACGGTTCGGGAAATCCTTACCATCACCACGAGGTGGAGACAGGGGAAGAAGATGATCATCACGGGTTGGAACTCGTTAGCTTTCTCACTGGCTGCGTGGATGCCATTGGATCAAGAAACGTAGCTGCTATAAACCAGTTCATCGCAAAATTAGGTGATCTTGCGTCTCCAAGGGGAACCCCCATAAGCCGCATATGCGCTTATTTCACAGAAGCCTTGGCCATCAGAGTAACAAGGCTTTGGCCTCATGTTTTTCACATTACCACAACTTCCCGAGACATGGTGGAGGATGACGAAACCGGAACTGCACTGAGGCTTCTCAACCAGGTGACCCCAATTCCCAAGTTTATCCATTTCACATCAAACGAGATGCTGCTGAGGGCGTTTGAAGGAAAAGACAGAGTTCACATAATAGACTTCGACATCAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGCCTAGCGTCGAGAACGCACCCTCCGAGTCACGTGAGAATCACGGGAATAGGAGAATCAAAGCAAGAGCTAAACGAAACCGGAGACAGACTCGCGGGCTTCGCGGAAGCGCTGAACCTCCCCTTCGAGTTCCACCCCGTCGTGGACAGACTCGAAGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCAGGAAACAGTGGCCGTGAACTGCATTTTGCAGCTGCACAAGACGCTTTACGACGGAAGCGGAGGAGCTTTGAGGGATTTCTTGGGACTGATCCGCAGCACGAATCCGAGCGTGGTGGTGGTGGCCGAACAGGAAGCAGAACACAACGAGGCAAGGTTGGAAGCAAGGGTGTGCAAGTCGTTGAAGTATTACTCAGCGTTGTTCGATTGCATCGAGGAAACTGGGGTGGCGCAAGAGAGTGCAGTGAGGGTGAAGATAGAGGAGATGTACGGGAGGGAGATAAAAAACATGGTGGCATGTGAAGGGAGGGAGAGGTTGGAGAGACACGAGAGTTTCGGGAAGTGGAGGAGGATGTTGGTGGAGCAAGGAGGGTTGAGATGTTTGGGAGTTTCTGAGAGGGAAATGAGTCAGAGCCAGTTGCTGTTGAAGATGTATTCTTGTGAGAGTTACAGTATAAAGAAGGTGGAGATTGAAGGAGCAACAGGGGTTACTCTTAGTTGGCTTGAGCAACCTTTGTACACTGTTTCAGCTTGGGTTCCTGTTGATGTTGCCGGTACCTCGTCCTCTTTTTCTCACCCAACATGA 1941 0.5137 MLAGCSSSTLLSPSHRLRSEAPAPFQACHFPRPSMSTQRLDLPCSTFTRKDSSSRSQPLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAATPLVEESIKDKSLKRLAEHDESFTNVPKRKKGITERDNSGDNFWFQPGVEGNTLGGLNNTSLAFSPEEETVCFVPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRPRQHHNDHATEGSVSNASSESQSLRLNENASEHEVGNGSGNPYHHHEVETGEEDDHHGLELVSFLTGCVDAIGSRNVAAINQFIAKLGDLASPRGTPISRICAYFTEALAIRVTRLWPHVFHITTTSRDMVEDDETGTALRLLNQVTPIPKFIHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTHPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEQETVAVNCILQLHKTLYDGSGGALRDFLGLIRSTNPSVVVVAEQEAEHNEARLEARVCKSLKYYSALFDCIEETGVAQESAVRVKIEEMYGREIKNMVACEGRERLERHESFGKWRRMLVEQGGLRCLGVSEREMSQSQLLLKMYSCESYSIKKVEIEGATGVTLSWLEQPLYTVSAWVPVDVAGTSSSFSHPT* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1472 646 MobiDBLite consensus disorder prediction 210 236 - -
Vra7g1472 646 Pfam GRAS domain family 262 630 IPR005202 -
Vra7g1472 646 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 635 IPR005202 -
Vra7g1472 646 PANTHER SCARECROW-LIKE PROTEIN 28 6 635 IPR030027 -
Vra7g1472 646 MobiDBLite consensus disorder prediction 195 255 - -
Vra7g1472 646 ProSiteProfiles GRAS family profile. 252 631 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1472 Vra-Chr7 32035451 32038678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1472 1 631 GRAS Transcription Factor Family AT1G63100 56.332 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra7g1472 GRAS 2.6e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1472 - - gmx:100786173 1027.7