Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1464 ATGGCTTTCGCTCCTGCCAAACCTTTCTCTAATAATTCTCTAATACACACTACCAAACATCCCCCAAAACCTCCCCTTTTGCTCAAGGACTACCTCAGGGACGACCTCAGTTCCTGTTCATCCAACGGTTTTAAATCGTTGCCGCGCCGACAATGCTGCACCACCGTCGGATTCTTCGTTGAGAAAGATCTCCAACTCCAACGAAAAAGGAACAACACACTCCCTCGACGTCGACGATCATCCGTGTCGGCTCTGCAGAGAGCTTCCGTGGCCGTAATCAACGCGATAAAGTCGCTTCCGATGTCACAAAAGGGTGGTAGAGCCAAGACAGGAGGCGTTCTCTGTAGAAGCCTCTCCAGGAAGCTGTTGAGTAGAAGCTTCTGGAGAAAAGCAGCAGTGGTGAGAGAAGATAGAAGCCAAGGCGTGCCGCGGAGGAGGACATCTTTCCGCGAACTCATTATGCTGGATCAGGAACATCAAAAAGCGACGTCGTTCAATGAGTATACTGCATTAGCTGCCCCGAGTTTCACCACTTCTTCTGGTTGTGGCAGTAACAGTTGGGGAGAGAGTGAATTCACGTTTGCATCTACTGCTGCTTCCTCTGAGAGCTCCAACGAAAACTACCTCCTGCTTGAGACAACCAAAGACTACACACCACGACGTCACAAGGTAGAAGAAGAAGTGGTAACCAAGGAATACTGGGGAAATGAGAAAGAACAGTTTAGTCCTGTATCGATACTAGATTGTCCATTTGTAGATGAAGAAGAGATTTACAAGTCTCGTTTCAGATCCACTTCCTCTGTTGTTTCCATCACGGAAGGAAGGAAACAGAAGCTTATGCACAAAAGATACCATTTTGAAAGTGTGGCCTCACCGGAGCCGGTGGTTTTAGAGAAAAGGTTCTCGAGGTTAGAGCTGGGGGATGAAACACTGGATCATTCTACAAAACGGTTGTGTCCTGCAAAGAATGACGACATTGAGGAGAAGGCTCGAAATCTTGTGAACTTGGTTAAAGGATCAAATCCACGGAACAGTTTGATACATAAGGCAGAGAAGCTGCTGTTTGATTACTTCAAGAAGAGTATCGGAGAATGTAAAGACATTGATCTGTCAAAAAAGCTTGAGCTTTGCAAGGTAGCAGAGGATTGGATAAACGGGCGACCCCAAGAAGTGTATTTGGATTGGGAAGAACAAGGAGGAAGGTCGGTGTATGTTAGGGAGATGGAGAGATGTGAAGGGTGGAAAAAGTATGATGAAGAAATACAAGAATTGGGTGGGAAGCTGGCAAACGAAGTCTTGGCAATTCTGGTTAATGAGTCAGTGCTTGATCTTATGATAGGTGGCAGCCACTGA 1353 0.4649 MAFAPAKPFSNNSLIHTTKHPPKPPLLLKDYLRDDLSSCSSNGFKSLPRRQCCTTVGFFVEKDLQLQRKRNNTLPRRRRSSVSALQRASVAVINAIKSLPMSQKGGRAKTGGVLCRSLSRKLLSRSFWRKAAVVREDRSQGVPRRRTSFRELIMLDQEHQKATSFNEYTALAAPSFTTSSGCGSNSWGESEFTFASTAASSESSNENYLLLETTKDYTPRRHKVEEEVVTKEYWGNEKEQFSPVSILDCPFVDEEEIYKSRFRSTSSVVSITEGRKQKLMHKRYHFESVASPEPVVLEKRFSRLELGDETLDHSTKRLCPAKNDDIEEKARNLVNLVKGSNPRNSLIHKAEKLLFDYFKKSIGECKDIDLSKKLELCKVAEDWINGRPQEVYLDWEEQGGRSVYVREMERCEGWKKYDEEIQELGGKLANEVLAILVNESVLDLMIGGSH* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1464 450 PANTHER OS04G0572500 PROTEIN 12 444 - -
Vra7g1464 450 MobiDBLite consensus disorder prediction 1 21 - -
Vra7g1464 450 PANTHER OS04G0572500 PROTEIN 12 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1464 Vra-Chr7 31921769 31925342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1464 25 444 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 27.789 2.77e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1464 - - var:108329219 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1464 7 31921769 31925342 Vra7g1464 7 31921769 31925342 ECH