Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1452 ATGGATTCCTTCTTTCTCGTTGTTCTAACCTTTGTCTTCAGCTTCCATATTCATTTTGCTCAAGCAAATCAACAACCTTCAACCGCCACCACTTCAAAAACATATATTATCCATGTGAAGGGCCCAAAGGGTACCACACTTGCTCAATCAGAAGATGTAGAGAGCTGGCATAATTCATTCATGCCACCAACTACTGCTATGAGCTCAGAGGATCAACCACGAATGATTTATTCATACCGGAACGTCATCAGTGGCTTTGCTGCAACACTCACTGAACAAGAGCTGAGACAAGTGGAAAAAAAAGATGGCTTTATCTCTGCTCACCCCGAAAGGATGCTGCATCGTCAAACTACACATACCCCACAATTTTTGGGGTTGAAGCGACAAATGGGACTGTGGAAGGAATCAAGCTTTGGAAAGGGAGTAATTGTTGGGGTGCTGGATTCTGGAATCACGCTTAATCATCCTTCATTCAGTGATGCAGGAATGCCACCACCACCACCCAAATGGAAAGGGAGATGCGAGCTTAATGGGACAGCATGTAACAATAAACTAATTGGAGCAAGGTCTTTCAACCTCGCTTCAGAGACAACGAAAGAAGCAGTGACACCAATTGATGAANATGGACATGGGACTCACACTGCGAGCACNGCAGCTGGTGCTTTCGTTGATAATGCACAAGTACTAGGAAATGCCAAAGGTACAGCNGCAGGNATTGCCCCTCATGCTCACCTGGCAATTTACAAAGTATGTTTTGGAGAAGACTGCCCAGAAAGCAGTGTATTGGCCGCATTGGATGCAGCNGTGGAGGATGGCGTNGATGTAATATCAATATCCCTTGGNCTANNNNNNNCACNTCCCTTTTTNNATGATAGCANNGCAATAGGNACNTTTGCAGCAATGCAGAAGGGAATCTTTNTAAGTTGTNCAGCNGGGAANTCTGGNCCNNTNCNNGGCTCCTTNNTNAATGGNGCNCCTTGGATCCTCACAGTNGGAGCAAGCAATNTTGACAGAAGNATTGTAGCAACAGCNNAGCTAGGAAANGGNCAAGAATTTGANGGNGAATCTNTTTTCCAGNCTTCCGANTNTNCTCCAACACNGCTNNNCNTANCATANGCNGGNAANAATGGCAAACNNNAAGCTGCNNTNTGTGCNANNGGATCCNTGNANNATNTTGATTTNAGNGGCAAGNTTGTTTTGTGTGAGAGAGGAGGGGNNANAGNAAGAATNNCCAAAGGNGAGGAAGTNAANAGAGNNGGTGGTNCAGCCATGATTNTCATGAATGATNAAAGNAATGGNTTCAGTCTCTNAGCTGATGTNCATGNTCTACCNGCAACACATGTAAGCTATGATGCAGGAGTTAAGATTAAAGCTTATATAAATTCAACTGAAACACCTACAGCTACCATTTTATTCAAGGGAACTGTAATAGGAAACTCCCTATCTCCGGCCGTTTCATCCTTCTCCTCAAGAGGTCCCAACTTGCCCAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCGTCAACATCCTAGCTGCCTGGCCATTCCCCCTTAACAACAGTACTGATTCAAAATCCACTTTCAACATCNTNTCNGGCACATCAATGTCATGCCCACATCTTAGTGGCGTAGCCGCTTTGCTCAAAAGCTCTCATCCTGACTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACATAATCAACCTTGAAAACAAACTCATTGTTGATGAAACACTTCACACAGCAGATGTCTTTGCCGCAGGTTCTGGCCACGTGAATCCCTCAAGAGCAAATGACCCTGGGTTAGTTTATGATATCACGCCTGATGATTATATACCTTATCTCTGTGGTTTAGGCTACAGCGATACAGAGGTTGGGATCATTGCACATAAAACAATTAAGTGCTCTGAGACTTCAAGCATTCTCGAAGGAGAGCTCAACTATCCCTCATTTTCTGTGGTGCTTGGTTCCCCAAAAACATTCACAAGGACTGTAACAAATGTAGGTGAGGCCAACTCGTCTTATGTTGTCCATGTTACAGCGCCAGAAGGGGTCAATGTGAAGGTCCAGCCAAATAAACTGAACTTTTCAGAAGCAAACAAGAAACAGAAATATTCAGTGTCATTCAGCCGCATAGATTCGGGTAATGAAACTGCGGAATATGCTCAAGGGTTTTTACAATGGGTCTCTGACAAACACACTGTAAGGAGTCCCATCTTAGTCAAATTTGTGTAA 2253 0.4243 MDSFFLVVLTFVFSFHIHFAQANQQPSTATTSKTYIIHVKGPKGTTLAQSEDVESWHNSFMPPTTAMSSEDQPRMIYSYRNVISGFAATLTEQELRQVEKKDGFISAHPERMLHRQTTHTPQFLGLKRQMGLWKESSFGKGVIVGVLDSGITLNHPSFSDAGMPPPPPKWKGRCELNGTACNNKLIGARSFNLASETTKEAVTPIDEXGHGTHTASTAAGAFVDNAQVLGNAKGTAAGIAPHAHLAIYKVCFGEDCPESSVLAALDAAVEDGVDVISISLGLXXXXPFXXDSXAIGTFAAMQKGIFXSCXAGXSGPXXGSXXNGAPWILTVGASNXDRXIVATAXLGXGQEFXGESXFQXSXXXPTXLXXXXAGXNGKXXAAXCAXGSXXXXDXXGKXVLCERGGXXXRXXKGEEVXRXGGXAMIXMNDXXNGFSLXADVHXLPATHVSYDAGVKIKAYINSTETPTATILFKGTVIGNSLSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNSTDSKSTFNIXSGTSMSCPHLSGVAALLKSSHPDWSPAAIKSAIMTSADIINLENKLIVDETLHTADVFAAGSGHVNPSRANDPGLVYDITPDDYIPYLCGLGYSDTEVGIIAHKTIKCSETSSILEGELNYPSFSVVLGSPKTFTRTVTNVGEANSSYVVHVTAPEGVNVKVQPNKLNFSEANKKQKYSVSFSRIDSGNETAEYAQGFLQWVSDKHTVRSPILVKFV* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1452 750 Pfam PA domain 385 455 IPR003137 -
Vra7g1452 750 CDD PA_subtilisin_like 343 470 - -
Vra7g1452 750 Pfam Fibronectin type-III domain 651 747 IPR041469 -
Vra7g1452 750 Gene3D - 621 749 - -
Vra7g1452 750 Pfam Peptidase inhibitor I9 34 114 IPR010259 -
Vra7g1452 750 CDD Peptidases_S8_3 113 571 IPR034197 -
Vra7g1452 750 Gene3D Peptidase S8/S53 domain 141 617 IPR036852 GO:0004252|GO:0006508
Vra7g1452 750 SUPERFAMILY Subtilisin-like 120 610 IPR036852 GO:0004252|GO:0006508
Vra7g1452 750 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 144 155 IPR023827 -
Vra7g1452 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 747 IPR045051 -
Vra7g1452 750 Gene3D - 337 478 - -
Vra7g1452 750 ProSiteProfiles Serine proteases, subtilase domain profile. 123 604 - -
Vra7g1452 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
Vra7g1452 750 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vra7g1452 750 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vra7g1452 750 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Vra7g1452 750 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 30 747 - -
Vra7g1452 750 Pfam Subtilase family 139 574 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1452 Vra-Chr7 31800907 31803500 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1452 4 749 Subtilisin-like Serine Gene Family AT1G04110 42.529 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1452 - - gmx:100785376 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1452 7 31800907 31803500 Vra7g1452 7 31800907 31803500 ECH
Vra7g1452 7 31800907 31803500 Vra11g0327 11 2350997 2353707 PCT