Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1450 ATGAATGCTTTCGTTTTCATTCTTCTCACTTTTGTGTTGAGCTTCCATATTCATTTTGCTANNAGCAGTTCAAAAACATATATTGTTCATGTGAAGGGGCCNCAGGNNAGGACACTTGCTGAATTAGATGATTTAGAGNGCTGGTATCATTCATTTTTNCCACCTTCTATTATGAGCTCTGAGGAACAACCACGAATAATTTATTCATATCGGCACGTGATAAGTGGTTTTTCTGCAAGACTGACGGAACAAGAGCTGAGAGAANTGGAAAAGAAGGATGGCTTTATCTATGCTCGCCCCGAAATGATNCTACATCCTCAAACCACACATACCCCANAAGTTTTGGGGTTGCAGCAGCAAACGGGACTNTGGAAGGAATCNAACTTTGGAAAGGGAGTAATTGTTGGGNTGNTGGATNCTGGAATCATGCCTGACCATCCNTCATTCAGTGATGCAGGAATGCCACCACCNCCACCCANATGGANAGGNAGATGNGANNTNAANGNNACANCNTGTAACAANAAACTAATTGGAGCAAGGNNTTTCNNCCNNGNNNNNNNNNCAANGAAAGNAGCAGNNNCNNNAATTGATGAANATGGACATGGGACTCACACNGCNAGCACNGCNGCTGGTGCTTTNGTTGATAATGCANAAGTACTAGGAAATGCCAAAGGCACAGCAGCAGGGATTGCCCCTCATGCTCACCTGGCAATNTACAAAGTATGTTTNGGANAAGACTGCCCAGAANGCAGTGTATTGGCCGCATTNGATGCAGCNGTGGAGGATGGCGTNGATGTAATATCAATATCCCTTGGCCTANGTNNNNCANNTCCCTTTTTTTATGATAGCATTGCAATAGGNACNTTTGCAGCAATGCAGAAGGGAATCTTTNTAAGTTGTNCAGCGGGGAANTCTGGCCCTTTCCCTGGCTCCTTGNTNAATGGAGCCCCTTGGATCCTCACAGTTGGAGCAAGCAATGTTGACAGAAGTATTGTAGCAACAGCANAGCTAGGAAACGGGCAAGAATTTGACGGCGAATCTNTTTTCCAGNCTTCCNATTATACTCCAACACTGCTACCNTTAGCNTATGCNGGTAATAATGGCAAACCTNAAGCTGCACTTTGTGCTAGGGGATCCCTGNACTATATTGATTTCAGCGGCAAGGTNGTTTTGTGTGAGAGAGGAGGGGATACAGGAAGAATTTNCAAAGGGGAGGAAGTAAAGAGAGTTGGTGGTGCAGCCATGATTATCATGAATGATNAAAGCAATGGCTTCAGTCTCTNAGCTGATGTACATGTTCTACCTGCNACACATGTAAGCTATGATGCTGGACTTAAGATTATAGCCTACATAAATTCAACTGAAACACCTACAGCTACCATTTTATTCAAGGGAACTGTAATAGGAAACTCCCTATCTCCGGCCGTTTCATCCTTCTCCTCAAGAGGTCCCAACTTGCCCAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCGTCAACATCCTAGCTGCCTGGCCATTCCCCCTTAACAACAATACTGATTCAAAATCCACTTTCAACATCCTTTCTGGCACATCAATGTCATGCCCACATCTTAGTGGCGTAGCCGCTTTGCTCAANAGCTCTCATCCTGACTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACATAACCAATTCTGATCAGAAACTCATTGTTGACGAAACACTTCAACCTGCCGATATCTTTGCCACAGGTTCTGGCCACGTGAATCCATCTAGAGCAAATGACCCCGGGCTAGTTTATGATATCACNCCAGATGATTATATACCTTATCTCTGNGGTTTAGGCTACGGAGATACGGAGGTTGGTATCATTGCGCATAAAACGATTATGTGCTCTGGGATTTCAAGCATTCCCGAAGGAGAGCTCAACTATCCCTCATTTTCTGTGGTGCTTGGTTCCCCAAAAACATTNACAAGGACTGTAACAAATGTAGGTGAGGCCAACTCGTCTTATGTTGTCNAGGTTACAGCGCCAGAAGGGGTCAATGTGAAGGTCCAGCCAGATAAACTGAACTTTTCAGAAGCAAACCAGAAAGAGGCATATTCAGTGTCATTCAGCCGTATAGAGTCGGGNAATGAAACTGCGGAATATGCTCAAGGGTTTTTACAATGGGTCTCTGCCAAACACACTGTAAGGAGTCCGATCTTAGTCATCTTTGGTTAA 2226 0.4263 MNAFVFILLTFVLSFHIHFAXSSSKTYIVHVKGPQXRTLAELDDLEXWYHSFXPPSIMSSEEQPRIIYSYRHVISGFSARLTEQELREXEKKDGFIYARPEMXLHPQTTHTPXVLGLQQQTGLWKESNFGKGVIVGXXDXGIMPDHPSFSDAGMPPPPPXWXGRXXXXXTXCNXKLIGARXFXXXXXXXKXAXXXIDEXGHGTHTASTAAGAXVDNAXVLGNAKGTAAGIAPHAHLAXYKVCXGXDCPEXSVLAAXDAAVEDGVDVISISLGLXXXXPFFYDSIAIGTFAAMQKGIFXSCXAGXSGPFPGSLXNGAPWILTVGASNVDRSIVATAXLGNGQEFDGESXFQXSXYTPTLLPLAYAGNNGKPXAALCARGSLXYIDFSGKVVLCERGGDTGRIXKGEEVKRVGGAAMIIMNDXSNGFSLXADVHVLPATHVSYDAGLKIIAYINSTETPTATILFKGTVIGNSLSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNNTDSKSTFNILSGTSMSCPHLSGVAALLXSSHPDWSPAAIKSAIMTSADITNSDQKLIVDETLQPADIFATGSGHVNPSRANDPGLVYDITPDDYIPYLXGLGYGDTEVGIIAHKTIMCSGISSIPEGELNYPSFSVVLGSPKTXTRTVTNVGEANSSYVVXVTAPEGVNVKVQPDKLNFSEANQKEAYSVSFSRIESGNETAEYAQGFLQWVSAKHTVRSPILVIFG* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1450 741 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vra7g1450 741 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Vra7g1450 741 PRINTS Subtilisin serine protease family (S8) signature 525 541 IPR015500 -
Vra7g1450 741 Pfam PA domain 372 447 IPR003137 -
Vra7g1450 741 Pfam Fibronectin type-III domain 642 738 IPR041469 -
Vra7g1450 741 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 739 IPR045051 -
Vra7g1450 741 MobiDBLite consensus disorder prediction 144 165 - -
Vra7g1450 741 Pfam Subtilase family 130 564 IPR000209 GO:0006508|GO:0008236
Vra7g1450 741 Pfam Peptidase inhibitor I9 26 99 IPR010259 -
Vra7g1450 741 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 22 739 - -
Vra7g1450 741 CDD PA_subtilisin_like 334 461 - -
Vra7g1450 741 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 105 IPR037045 -
Vra7g1450 741 ProSiteProfiles Serine proteases, subtilase domain profile. 114 595 - -
Vra7g1450 741 Gene3D Peptidase S8/S53 domain 132 608 IPR036852 GO:0004252|GO:0006508
Vra7g1450 741 Gene3D - 612 739 - -
Vra7g1450 741 SUPERFAMILY Subtilisin-like 107 599 IPR036852 GO:0004252|GO:0006508
Vra7g1450 741 CDD Peptidases_S8_3 104 562 IPR034197 -
Vra7g1450 741 Gene3D - 328 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1450 Vra-Chr7 31780810 31783035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1450 6 738 Subtilisin-like Serine Gene Family AT1G04110 42.894 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1450 - - gmx:100812208 1142.87