Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1446 ATGGAGTCCCGACAAAACTTGTATCTGTCGTATTCTTCTGATTGTCTTTGCATAACTCGCCATGTCTACCTTCCCTACTTGTTAAAAATATATAAATATACGGTATCCTCACCATGTGAAATCCCAATACACCACCATACCATACCATACCATACCATGCCTCTCTCCTCAATTCTATCTCAAACCCATTATTTCTCTGATCAACCCATAACTACCCTTCTTCTCTTTTTCTTCCTTTTCCTAGTTGCGTCCTACTTATTCCTCAAACCCAACCCCCGAAACCTACCGCCGGGTCCACCGGGCCTACCCTTCTTCGGGAACCTTTTATCTCTGCACCCAGATCTTCACACTTACTTCGCCGCCTTGGCCCAGATACACGGCCAAATTTTCAAACTTCGACTCGGGAGCAAGCTCGCCATCGTCATAACTTCACCCACCCTTGCTCGCGAGGTCCTCAAAGACCATGACACTGTTTTCGCCAACCGCGACGTCCCCGTAGCCGGTAGGATTGCCACCTATGGCGGCACCGACATAGTATGGACCCCGTACGGCCCCGAATGGCGGATGCTGAGGAAAGTGTGCGTGGTGAAGATGTTGAGCAACGTCACCCTGGATTCCGTCTACGATCTGCGTCGCAGCGAGGTGTGCAAAATGGTGTCCTATTTGTACGATCGAGCGGGGAGTGCGGTGAACGTGGGGGAGCAGGTGTTTCTAGCGGTGATGAATGTGATAACCAGTATGATGTGGGGCGGGGAGGTAGAAGGGGTGGATAGGGAAAGTGTGGGAGCGGAGTTCAGGGAGTTGGTAGCGGAGATGACGCAGCTGCTGGGGAAGCCCAATGTTTCGGACTTTTTTCCTGGGTTGGCCCGGTTCGATTTGCAGGGCGTGGAGAAAGATATGCAGGCGCTGGTGCCCCGGTTCGATGCGATATTTGAAAGGATGATTGGCGAAAGAGTGAAGGTGAACCAAAAAGAAGATCGGAAAAAGAAAGAAAGAAAAGATTTTCTGCAGTTTTTGTTGGATCTTAAGGATTCTGAAGGCTCTGATTCAAAGACACCATTCACCATGACCCACCTTAAGGCCCTCCTCATGGATATGGTTGTGGGTGGAACCGATACATCTTCAAACACAATTGAGTTTGCAATGGCAGAAATAATGCAGAAGGCAGAAGTAATGAAGAAAGTCCAAGAAGAGTTGGAAGTTGTGGTTGGAAAAGATAAAATGGTAGAAGAGTCTGACATTCATAAGTTGCATTACTTGGAAGCAGTGATGAAAGAGACTCTTCGGTTGCATCCTGCACTTCCACTTCTAGTTCCACATAGCCCCAGTGAAAGCAGCAACGTCGGAGGCTACACCATCCCAAAGGGTTCTCGAATCTTCATCAATGTGTGGGCCATTCATAGAGACCCTTCAGTTTGGGAGAAACCTCTGGAATTTGATCCTACAAGGTTCTTGGATGCTAAGTGGGATTTCAGTGGCAATGACTTCAGTTATTTTCCCTTTGGATCTGGAAGAAGAATCTGTGCAGGAATAGCAATGGCTGAGAAGACTGTTCTTCATCTTCTTGCAACACTTATACACTTGTTTGACTGGACAATACCACAAGGAGACAAGTTAGAAACAGAAGAAAAATTTGGAATTGTTCTAAGAAAGAATGTTCCTCTAGTTGCTATTCCCACCCCACGCTTCTCCAACCCACACTTTTATAAGTAG 1713 0.4729 MESRQNLYLSYSSDCLCITRHVYLPYLLKIYKYTVSSPCEIPIHHHTIPYHTMPLSSILSQTHYFSDQPITTLLLFFFLFLVASYLFLKPNPRNLPPGPPGLPFFGNLLSLHPDLHTYFAALAQIHGQIFKLRLGSKLAIVITSPTLAREVLKDHDTVFANRDVPVAGRIATYGGTDIVWTPYGPEWRMLRKVCVVKMLSNVTLDSVYDLRRSEVCKMVSYLYDRAGSAVNVGEQVFLAVMNVITSMMWGGEVEGVDRESVGAEFRELVAEMTQLLGKPNVSDFFPGLARFDLQGVEKDMQALVPRFDAIFERMIGERVKVNQKEDRKKKERKDFLQFLLDLKDSEGSDSKTPFTMTHLKALLMDMVVGGTDTSSNTIEFAMAEIMQKAEVMKKVQEELEVVVGKDKMVEESDIHKLHYLEAVMKETLRLHPALPLLVPHSPSESSNVGGYTIPKGSRIFINVWAIHRDPSVWEKPLEFDPTRFLDAKWDFSGNDFSYFPFGSGRRICAGIAMAEKTVLHLLATLIHLFDWTIPQGDKLETEEKFGIVLRKNVPLVAIPTPRFSNPHFYK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1446 570 PANTHER OS08G0547900 PROTEIN 62 570 - -
Vra7g1446 570 PRINTS E-class P450 group I signature 123 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 147 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 239 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 358 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 378 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 421 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 462 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 498 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS E-class P450 group I signature 508 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 Pfam Cytochrome P450 96 551 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS P450 superfamily signature 369 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS P450 superfamily signature 499 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PRINTS P450 superfamily signature 508 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 62 570 - -
Vra7g1446 570 Gene3D Cytochrome P450 88 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 Coils Coil 378 398 - -
Vra7g1446 570 SUPERFAMILY Cytochrome P450 96 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1446 570 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 501 510 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1446 Vra-Chr7 31724873 31728150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1446 62 569 Cytochrome P450 AT4G12300 58.641 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1446 - - vra:106769527 1082.78