Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1440 ATGAGTTTCCTTCATTTCCTCTTTCTGTGGGTGTTGGTTGCAGTTTCCAGTTCACACCTGGTTCGTGGAAATGCAGAGCTGAGAGCTCTGATGGACCTGAAAAAATCTCTGGACCCAGAGGACATGGTGCTTGGCTCGTGGACCAGTGATGGTGATCCATGCAGTGGTTCGTTCTTGGGGGTTGCGTGCAACGAGCATAACAAAGTGGCGAATATATCATTGCCAGGAAGAGGTCTTTCTGGCCGTGTCTCTCCAGCTGTGGCTGAACTCAGATGCTTGTCAGGTCTATACCTACATTTCAACCACCTCTCTGGGGACATACCCAGAGAGATTGCAAATCTAACAGAATTGATGGATCTTTATCTCAACGTTAATAATCTATCTGGAACAATTCCCCCTGATATCGGGAACATGATTAGCCTCCAAGTGCTGCAGTTAGGCTATAACCAGTTAGCGGGGAACATACCCAAGGAACTGGGTTCGTTGAAGCAGCTTAGTGCTATTTCTTTGCAACATAACAAATTAACTGGTCAGATTCCTCTAACCTTGGGTAGCTTGGAGAACCTAAGGATGCTATATTTGAGCTCTAACAACTTCAATGGCATAATCCCTGCAACACTAGCTGATATTGCAAACTTGGAAGTTCTAGATATTCAAAACAATTCTCTTTCAGGGACAGTTCCTTCTGCATTGCGGAGATTAGGGGAAGGATTCAAAGGTGCAAACAACCCAGATCTCTGCGCAGTTGGGTTTTCTACTTTGAAAACTTGCAACAATGATACAATATATAGCGTTGGTCAGATTAGTTCCCGAAATATATCCATAAATAATAATCCCTCGATAACTTTATCGAATCCTGCGACTACCCACTTGAACTGTAACCAGATGCATTGCTCAAAATCAGGAAGGTTTCTCCATCTTGTCATTGCCGCGAGTGTGACAACTACCATTATTACATTCTTAAGTTCTGGAATTTTCATGTTTGTCAGATACCGCCGCCATAGGCAGAGGGTTAGGAACACGTCAGATTGTTCTGAAAGCCAACCTAGTCCTTACCTGGCCAAAGATTTCTACAGAAGTTCATCTCCACTTGTTAATCTTGAGAATTACTATAATGGTTGGGACTCAGTGGCCGATGGTCAAAATGCAAGTGGATTATCCCTTGAATATCTGAACCGTTTTAGATTTAATATAGACGAGATAGAATCCGCAACACAACACCTTTCCGAGGCCAATCTACTGGGTAAGAGCAAACTCTCAGCAGTCTATAAAGGTGTTCATAGAGACGGTTCTCTTGTGGCCATTAGAAGCATCAGCGCGACTTGCTGCAAAACTGAGGAAGACGAATTTTTGAAGGGGTTGATCCTATTAACCACTCTGAGACATGAAAATATTGTTAAGATGAAAGGTTTCTGCTACTCAAGGAGCAGAGGTGAATGGTATTTTGTCTATGACTTTGCCACCAGGGGCAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGACAGTGTACTTGAATGGTCCAAAAGGGTTTCTATCATCAGGGGTATTGCAAAAGGTATTGGTTATTTGCACAACAACGAAACAAGCAAGCCTACAATAGTACACCAAAACGTTTCAGTTGAAAAGGTTATTCTAGACCATGAATTTAACCCCTTGATCATGGATGCTGGCCTCCCTAAGCTTCTTGCAGAGGATGTAGTTTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATACCTTGCACCAGAATATATTACTACTGGGCGATTTACTGAGAAGAGTGACATATATGCTTTTGGGGTCATTGTCCTTCAAGTTCTATCTGGAAAGGCATTGATAGGGGGTTCAATCCGGGTTGCAGTTGAAGCTTTTAGATTTGAAGATTTTGTTGACAAAAATCTGAAGGGAAATTATTCTAAGTCAGAAGCTGCAATTCTTTCAAAGCTTGCAATTATGTGCACCCATGAAGTGCCAGAGCAAAGGCCAACCATGGTGGAGGTGATTCAAGAGCTGGCCATGCTTCCTCTCCATTCTTCTTCATAA 2049 0.4275 MSFLHFLFLWVLVAVSSSHLVRGNAELRALMDLKKSLDPEDMVLGSWTSDGDPCSGSFLGVACNEHNKVANISLPGRGLSGRVSPAVAELRCLSGLYLHFNHLSGDIPREIANLTELMDLYLNVNNLSGTIPPDIGNMISLQVLQLGYNQLAGNIPKELGSLKQLSAISLQHNKLTGQIPLTLGSLENLRMLYLSSNNFNGIIPATLADIANLEVLDIQNNSLSGTVPSALRRLGEGFKGANNPDLCAVGFSTLKTCNNDTIYSVGQISSRNISINNNPSITLSNPATTHLNCNQMHCSKSGRFLHLVIAASVTTTIITFLSSGIFMFVRYRRHRQRVRNTSDCSESQPSPYLAKDFYRSSSPLVNLENYYNGWDSVADGQNASGLSLEYLNRFRFNIDEIESATQHLSEANLLGKSKLSAVYKGVHRDGSLVAIRSISATCCKTEEDEFLKGLILLTTLRHENIVKMKGFCYSRSRGEWYFVYDFATRGNLSQYLDKEDGSDSVLEWSKRVSIIRGIAKGIGYLHNNETSKPTIVHQNVSVEKVILDHEFNPLIMDAGLPKLLAEDVVFSALKASAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKALIGGSIRVAVEAFRFEDFVDKNLKGNYSKSEAAILSKLAIMCTHEVPEQRPTMVEVIQELAMLPLHSSS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1440 682 SUPERFAMILY L domain-like 27 233 - -
Vra7g1440 682 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Vra7g1440 682 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Vra7g1440 682 Gene3D Ribonuclease Inhibitor 24 307 IPR032675 -
Vra7g1440 682 PANTHER OS01G0253100 PROTEIN 19 674 IPR045271 GO:0004714|GO:0006468
Vra7g1440 682 SUPERFAMILY Protein kinase-like (PK-like) 384 676 IPR011009 -
Vra7g1440 682 Gene3D Phosphorylase Kinase; domain 1 374 486 - -
Vra7g1440 682 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 19 674 - -
Vra7g1440 682 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Vra7g1440 682 SMART LRR_typ_2 186 209 IPR003591 -
Vra7g1440 682 SMART LRR_typ_2 138 162 IPR003591 -
Vra7g1440 682 SMART LRR_typ_2 90 114 IPR003591 -
Vra7g1440 682 SMART LRR_typ_2 210 233 IPR003591 -
Vra7g1440 682 ProSiteProfiles Protein kinase domain profile. 408 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1440 682 Gene3D Transferase(Phosphotransferase) domain 1 488 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1440 Vra-Chr7 31678571 31681703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1440 6 521 Miscellaneous Gene Families AT4G22730 52.091 2.26e-180 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Vra7g1440 PK_Tyr_Ser-Thr 2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1440 - - gmx:100784155 1091.64