Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1419 ATGGATCCAATCACAGCACATGGTCAGTCCCTTCCCCCTCCTTTCCATCCAAGAGATCTCCATCTGCACCACCAGCCGCAGCAGCACCAATTCCAAACCTTAAACCAAGCCACCGACGACGAGAACAGCGGAAGCAGCAGCGCTCAGAAAAGGGACCGCGAAGACAACAACGGCAACAACAACGATGAAGGTGCTGGTGAGGCTGAGATAACAAGGAGACCTCGCGGGAGACCAGCCGGCTCCAAAAACAAACCCAAGCCACCCATTATCATCACTCGCGACAGCGCCAACGCCATGAGAACCCACATGATGGAGGTGGCAGACGGCTGCGACATCGTTGACAGCGTGTCTGAGTTCGCCAGGAAACGCCAGAGAGGGGTTTGCATCTTGAGTGGGACTGGCACAGTCACCAACGTCACTCTCAGGCAACCGGCTTCTTCTGGTGCGGTTGTCACTCTCCATGGAAGGTTCGAGATTTTGTCCCTCAGTGGATCTTTCCTTCCGCCGCCTGCTCCACCGGCTGCTTCCGGTTTGACCATTTACTTGGCCGGTGGGCAGGGACAGGTGGTGGGAGGGAGTGTGGTTGGGACGCTGGTTGCTTCGGGGCCTGTGGTGATCATGGCTGCTTCGTTCAGCAACGCTGCTTACGAGAGGCTTCCTTTGGAGGATGAAGACCCTTCGCTGCAAATGCAAGGAGGCTCAATTGGGTCACCCGGTGCAAGTGGTGTTGGTCAGTCACAGCTTCTAGGAGGAGGAGATGCAACTGCTCCACTTTTCCATGGTTTGCCTAACCTTCTCAATTCTGTTCAAATGCCATCTGAGCCATTCTGGGCATCCAATCGCCCACCCTTCTAG 855 0.5579 MDPITAHGQSLPPPFHPRDLHLHHQPQQHQFQTLNQATDDENSGSSSAQKRDREDNNGNNNDEGAGEAEITRRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGCDIVDSVSEFARKRQRGVCILSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVASGPVVIMAASFSNAAYERLPLEDEDPSLQMQGGSIGSPGASGVGQSQLLGGGDATAPLFHGLPNLLNSVQMPSEPFWASNRPPF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1419 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 284 IPR014476 GO:0003680
Vra7g1419 284 CDD DUF296 100 211 IPR005175 -
Vra7g1419 284 PIRSF ESCAROLA 16 284 IPR014476 GO:0003680
Vra7g1419 284 MobiDBLite consensus disorder prediction 26 44 - -
Vra7g1419 284 MobiDBLite consensus disorder prediction 1 91 - -
Vra7g1419 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Vra7g1419 284 Gene3D - 99 231 - -
Vra7g1419 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 284 - -
Vra7g1419 284 MobiDBLite consensus disorder prediction 45 76 - -
Vra7g1419 284 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Vra7g1419 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1419 Vra-Chr7 31430604 31432564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1419 9 284 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 55.660 3.78e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1419 - - gmx:100807581 460.299