Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1410 ATGGCAACAAAGCTACTATGTCTTTCTCTGCTCATTCTAAATCTGCTCCTTCACATGTCTACCACCGCCGAATCCGCAACTGCGACAACAGACTTCATCAAGTCCTCATGCAAGGCGACAAGGTACCCCGTGGCGTGCGTTGAAAGCCTCTCAGGCTACGCCAGCAAGATTAGGCCGAGCGAGGAAGAACTAGCCAGCACTGCCATGAGCGTGAGCGTATCCAAGACTCGATCATGCGTATCGTCTCTTGAGAAGATGAAGAAGACGAAGGGACTGCAAGCAAGAGAGTACAATGCGGTGCAAGATTGCATAGAGAACATGAATGATAGTGTGGACAATCTTAACCGATCTATGAAGGAACTGGACCTCCTGGGTAAGGGGAAGGATTCCCGGTTGCACATCAGCAATATTCAGACTTGGGTTAGTGCTGCTATGACTTGTCAGGACACGTGTCTTGACAGCATTAATGATGCTAATTTCAAGTCTTCCATTAAACCTATGGTTGTCGATGCTTCTCAAGTCACCAGTAATGCTCTTGCATTGGTTAATCGCTTTGCCTCCAAGTACCGCACTTAG 576 0.4792 MATKLLCLSLLILNLLLHMSTTAESATATTDFIKSSCKATRYPVACVESLSGYASKIRPSEEELASTAMSVSVSKTRSCVSSLEKMKKTKGLQAREYNAVQDCIENMNDSVDNLNRSMKELDLLGKGKDSRLHISNIQTWVSAAMTCQDTCLDSINDANFKSSIKPMVVDASQVTSNALALVNRFASKYRT* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1410 191 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 186 IPR035513 -
Vra7g1410 191 PANTHER PECTINESTERASE INHIBITOR 9 10 189 - -
Vra7g1410 191 Pfam Plant invertase/pectin methylesterase inhibitor 31 181 IPR006501 GO:0004857
Vra7g1410 191 Coils Coil 104 124 - -
Vra7g1410 191 SMART PMEI_2 28 181 IPR006501 GO:0004857
Vra7g1410 191 CDD PMEI-like_3 35 187 - -
Vra7g1410 191 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 185 IPR035513 -
Vra7g1410 191 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 183 IPR006501 GO:0004857
Vra7g1410 191 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1410 Vra-Chr7 31334307 31335140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1410 33 182 Carbohydrate Esterase AT3G14310 27.742 1.50e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1410 - - var:108341180 295.434