Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1407 ATGAACACATTTTCGCATGTACCTCCAGGCTTTCGGTTTCATCCGACTGATGAAGAACTGGTAGGTTACTACCTTAGGAAGAAGGTAGCATCTAAAAGGATTGATCTAGATGTGATCAAAGATGTAGATCTCTATAAGATTGAACCATGGGATCTTCAAGAGCTATGCAAAATAGGAACAGATGAACAAAGTGACTGGTATTTCTTCAGTCATAAAGATAAGAAATATCCAACTGGAACTCGCACGAATAGAGCTACAAAAGCAGGGTTTTGGAAAGCGACGGGAAGAGACAAGGCAATATACTCTAAGCATTGCCTGATTGGCATGAGAAAGACTCTTGTGTTTTACAAAGGAAGAGCCCCAAATGGACAGAAGTCTGATTGGATCATGCATGAGTACAGGCTAGAAACTAATGAAAATGGAACTCCTCCGGAAGAAGGATGGGTTGTGTGCAGAGTGTTCAAGAAGCGAATGACTACAATGCAGAAAGTGGGAGAGTATGATCAGTCACCCTGTTGGTACGATGAGCAAGTTTCCTTCATGCAAGATTTTGAATCCCCAAGGCGCATTTCTCAGCCTTATGCATCATACCATCAGCACCACCCATGCAAACCTGAGCTCATGGATTTGCAATACAACAACATACCCCACGATGCATTCCTCCAACTTCCGCAACTCGAAAGCCCCAAACTAACTCACTCAGCACCCAGTTTGAGCTGCAGCTCAGTTGTCCCTTTTGCTTATGAAACCAGCAACAACAAAAACAATGGCAGCACCTTGCAGTTCTCATCACTCTCTCAGGAAGAACAGATACAATACTGCCACCAACAAAGTCAAAATTCCCTCTATGATAATGCGGTTGACCAAGTCACAGATTGGCGAGTGCTTGACAAATTTGTTGCTTCTCAACTTAGTCACAACCAAGATGTTTCCAAGGAGACCAGTTATTCCAATGCACCTATTTTCCAAGTGGCTGAACAAATTTCTGTGGTAACCAATGGATCCAAAAAGGAGCAAATTTCTCAGGAATATGCTTCAACATCTACCTCCAGTTGCCAGATTGACCTGTGGAAGTGA 1077 0.4299 MNTFSHVPPGFRFHPTDEELVGYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKIGTDEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTPPEEGWVVCRVFKKRMTTMQKVGEYDQSPCWYDEQVSFMQDFESPRRISQPYASYHQHHPCKPELMDLQYNNIPHDAFLQLPQLESPKLTHSAPSLSCSSVVPFAYETSNNKNNGSTLQFSSLSQEEQIQYCHQQSQNSLYDNAVDQVTDWRVLDKFVASQLSHNQDVSKETSYSNAPIFQVAEQISVVTNGSKKEQISQEYASTSTSSCQIDLWK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1407 358 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Vra7g1407 358 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 347 - -
Vra7g1407 358 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Vra7g1407 358 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Vra7g1407 358 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Vra7g1407 358 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1407 Vra-Chr7 31278585 31284517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1407 1 358 NAC Transcription Factor Family AT1G12260 57.609 2.79e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g1407 NAM 1.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1407 - - gmx:100783529 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1407 7 31278585 31284517 Vra7g1407 7 31278585 31284517 ECH