Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1381 ATGTTTCTGCTTTTCAGTTCTTGCATGTTATTATTGCATGCAACAACTGTCACATGCACAACCTACCACGACACCATTCCCAAAATGCTGTCTTCCACAAACTCATCAAGGTGGATCCGACCCACCGGTCACCGAGTAATCACCGTCGACATTAACGGCGGAGGCCATTTCCGATCAGTCCAAGCGGCCGTCAATGCTGTCCCGGACAACAACACAATGAACGTTCATATTCAGATAAGCCCCGGATATTACATAGAGAAGGTGGTAGTGCCCGTGACGAAGCCGTACATTAGATTGGAAGGAGCGGGGAGAGATGTGACGGTGATAGAATGGCATGACAGGGCGAGTGACCCTGGTCCCAACGGCCAACAATTGCGTACTTACAGAACAGCTTCTGTTACAGTTTTTGCCAACTATTTCTCTGCTAGGAATATCAGCTTCAAGAACACTTCTCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAAGCGGCGGCGTTTCGCATTTCCGGGGACAAAGCCTATTTCTCCGGCTGCGGTTTCTACGGTGCACAAGACACTCTCTGCGACGATGCTGGCCGTCATTACTTCAAAGAATGTTACATTGAGGGTTCCATCGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCAGGCTACACTCAATTGCCACGAGGTTTGGGTCAATAGCAGCCCAAGATAGGAAATCCCCATACGAGAAAACAGGCTTCGCATTCGTACGGTGCAAAGTGACAGGAACAGGCCCAATTTATGTGGGCCGTGCAATGGGCCAGTACTCTAGGATTGTCTATGCCTACACCTACTTCGACAACATAGTTGCACATGGTGGTTGGGATGATTGGAACACTTCCTACAATAACAAGACTGTGTTCTTTGGAGTGTATAAATGCTGGGGACCTGGTGCTGCGGCTATACGTGGAGTCCCATTAGCCAAAGAGCTAGATTTTGAATCTGCCCACCCATTCCTGGTCAAGAGTTTTGTTAATGGGAAACACTGGATGACACCCTCTGATGCTTAG 1044 0.4923 MFLLFSSCMLLLHATTVTCTTYHDTIPKMLSSTNSSRWIRPTGHRVITVDINGGGHFRSVQAAVNAVPDNNTMNVHIQISPGYYIEKVVVPVTKPYIRLEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTSPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCRLHSIATRFGSIAAQDRKSPYEKTGFAFVRCKVTGTGPIYVGRAMGQYSRIVYAYTYFDNIVAHGGWDDWNTSYNNKTVFFGVYKCWGPGAAAIRGVPLAKELDFESAHPFLVKSFVNGKHWMTPSDA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1381 347 ProSitePatterns Pectinesterase signature 2. 201 210 IPR033131 -
Vra7g1381 347 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 346 - -
Vra7g1381 347 PANTHER PECTINESTERASE 68-RELATED 20 346 - -
Vra7g1381 347 SUPERFAMILY Pectin lyase-like 44 344 IPR011050 -
Vra7g1381 347 Pfam Pectinesterase 47 338 IPR000070 GO:0030599|GO:0042545
Vra7g1381 347 Gene3D - 42 346 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1381 Vra-Chr7 30904563 30908687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1381 2 347 Carbohydrate Esterase AT5G47500 70.605 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1381 - - gmx:100796327 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1381 7 30904563 30908687 Vra7g1381 7 30904563 30908687 ECH