Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1375 ATGTCCTCTCTTGGTATCAGTTTTGATTTGATTTTGCAGAGAGGAAAAGTTACGACAATGGTGAATGGAGGGTTGGTGGAAGATGTTGCAGTGATTGGAGGGTTGATAGGGGTGCAATTTGTTTACGCAGGAAACGCTTTGTTGCTCAGTTATCTTATGTCTTTGGGCCTCGAATCTCTTACCATTGTCACTTTTACTTCCTTTGCTACGTTCCTTATTCTCTTACCCTTTGCCTTCTATTATGAAAGGTGTCGATGGCCCACCAAAGTTGGTTTCAAGTTGCTTACACAGCTTTTCTTGCTTGCACTAGGAGGGGTAACAATGTTCCAGTCTCTATTTCTAAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACAGCCATGCCAAATCTTGCACCAGGGCTCATCTTCATCATGGCATGGATTTTTCGGTTGGAAAAAGTAAAGTTAAGCTGCACATATAGTAGAGTAAAAATAGTTGGCACATTGCTTTGTGTCTTAGGAGCTCTCACACTTAGCATAATGCAAAGCATATCTGCACCTCCTAAGTCCAATAAAGTGGGAACAATTCAATCACCATCTCCACCAATACATGTAACATTTGACAGTCACAAGCTAATCGGTTGTCTATATCTTTTGGTCGCAATCCTTATATTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTGGGAGATTTTCCTGCACCGATGTCGTTGTGTTCAATAACTTGCTTTTTTGGGACATTCATGACTGTTGCAGTTCAATTAATTGAAAATCACGAATTCAAAACTGGTTGGCCTATTGTGAGGGTCGGAGATATTATTGGATATTCTCTTCTGGCAGGTGTAGTGAGTGGAATATGCCTGACTGTGAATTGTTGGGCACTTGAGAAAAGAGGGCCAGTGTTGGTGTCCATGTTCAGCCCTATTGGCACAGTCTGCTCAGTCATTTTCTCAGTTGTTACTCTAGGACACACCACCAACATTGGAAGCTTAGCAGGTATGTTCCTGATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGTTGCTTTGATAGTGAATATGACGCAGAGAAGCCTCTTTTAAGTTAA 1104 0.4212 MSSLGISFDLILQRGKVTTMVNGGLVEDVAVIGGLIGVQFVYAGNALLLSYLMSLGLESLTIVTFTSFATFLILLPFAFYYERCRWPTKVGFKLLTQLFLLALGGVTMFQSLFLKGINLTSPAMGTAMPNLAPGLIFIMAWIFRLEKVKLSCTYSRVKIVGTLLCVLGALTLSIMQSISAPPKSNKVGTIQSPSPPIHVTFDSHKLIGCLYLLVAILILSSNIVLQAFTLGDFPAPMSLCSITCFFGTFMTVAVQLIENHEFKTGWPIVRVGDIIGYSLLAGVVSGICLTVNCWALEKRGPVLVSMFSPIGTVCSVIFSVVTLGHTTNIGSLAGMFLMFTGLYFVLWAKGKEGCFDSEYDAEKPLLS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1375 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 270 350 - -
Vra7g1375 367 PANTHER WAT1-RELATED PROTEIN 28 367 IPR030184 GO:0016021|GO:0022857
Vra7g1375 367 PANTHER OS11G0588100 PROTEIN 28 367 - -
Vra7g1375 367 Pfam EamA-like transporter family 207 346 IPR000620 GO:0016020|GO:0016021
Vra7g1375 367 Pfam EamA-like transporter family 36 173 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1375 Vra-Chr7 30850196 30853187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1375 25 358 Nodulin-like Gene Family AT5G47470 55.522 2.44e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1375 - - gmx:100809182 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0376 11 2742564 2744802 Vra7g1375 7 30850196 30853187 PCT