Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1353 ATGCATATAGAGGAATTGAAGGGGGGTGACACAGAAGAAGGTGAGGGGGAAAGAGGGTTGACGCTTCTGGGTTATGATGCAAAGAGGGCGTTGGTTGGAGCAGGTGCTCGTGTGCTATTCTACCCAACCCTTTTTTACAATGTTGTCAGGAATAAGATTGAGGCTGATTTTCGATGGTGGGATAAGGTTGATGAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCACACTTGAAGGAGCTTGGTGTTCGTGGGGTCATCACATTGAATGAGTCATATGAAACTTTGGTTCCGACAACATTATATTATACTCACGGAATTAACCACTTAGTGATCCCTACTAGAGATTACTATTTTGCTCCTTCACTGCATGACATACGACGTGCTGTGAACTTCATACATGAAAATGCATTATCTGGACGCACTACATATGTGCATTGCAAAGCTGGACGCGGGCGCAGCACAACTATTGTTATTTGTTATCTGGTGCACCACAAAATGATGACACCTGATGCTGCATATAATTATGTGAAATCAATTCGACCAAGGGTGCTTCTAGCTTCCTCTCAGTGGCAAGTTGTCCAAGAATACTACCATCATATTATGGTGAGGAGGGCAGTTGGATGTGCTCCTTCAACCAATCTATTGGTAAAGGCTTCTGAAGGGGCACTAGATTCCCAAGATGTTGTGATATTTGATGACAGTTCTTTTGTCATGGTAACTGGGTCAGATTTAGAAGGTTACAACCCAAGTAATCAATCGAGAACTGTGGCAAGTGAAATATGGGCAGATTTAAGTGTTGTGTATCGTGTAAGAGTTGCTGGACAAGCGGCATTTGAGAGAATATCCTGCCTTTGGCTACGATATGGTACTAATCACAATACTTTTACTGCGAAACCAAGCAATCGTCATTTGGGAGAAATTAATGTCGATATCCGCATGTACTGA 957 0.4242 MHIEELKGGDTEEGEGERGLTLLGYDAKRALVGAGARVLFYPTLFYNVVRNKIEADFRWWDKVDEFILLGAVPFPIDVPHLKELGVRGVITLNESYETLVPTTLYYTHGINHLVIPTRDYYFAPSLHDIRRAVNFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHHKMMTPDAAYNYVKSIRPRVLLASSQWQVVQEYYHHIMVRRAVGCAPSTNLLVKASEGALDSQDVVIFDDSSFVMVTGSDLEGYNPSNQSRTVASEIWADLSVVYRVRVAGQAAFERISCLWLRYGTNHNTFTAKPSNRHLGEINVDIRMY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1353 318 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Vra7g1353 318 PANTHER - 1 318 - -
Vra7g1353 318 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Vra7g1353 318 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 203 IPR029021 -
Vra7g1353 318 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Vra7g1353 318 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Vra7g1353 318 Gene3D Protein tyrosine phosphatase superfamily 59 209 IPR029021 -
Vra7g1353 318 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 318 - -
Vra7g1353 318 SMART ptp_7 101 205 IPR003595 -
Vra7g1353 318 CDD PTPMT1 59 201 IPR044596 GO:0004721
Vra7g1353 318 Pfam Dual specificity phosphatase, catalytic domain 81 201 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1353 Vra-Chr7 30534899 30538690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1353 1 318 Protein tyrosine phosphatase (PTP) family AT2G35680 57.059 1.93e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1353 - - gmx:100790413 499.975